Coregonus clupeaformis (lake whitefish): 121580581
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Entry
121580581 CDS
T08357
Name
(RefSeq) cadherin-7-like
KO
K06799
cadherin 7, type 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121580581
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121580581
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
121580581
NCBI-ProteinID:
XP_041751471
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Position
14:complement(7286375..7430386)
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AA seq
798 aa
AA seq
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MRLNCPPMWSVVSVLTVVVPLWEMGCSGLTLNSVPLHRIGTYQRCGEGGTHHRQRRSWVW
NQFFVLEEYMGDEPLYVGKLHSDVDKGEGRVKYVLNGEGATSIFTIDENTGDIHATKRLD
REEQAYYTLRAQARHRDTNLPVEPESEFVIKVQDINDNEPKFLDGPYSARVPEMSPVGTS
VVTVVATDADDPTYGNSARVVYSILEGQPYFSVEPRTGVVRTALPNMDREAREQYLLVIQ
AKDMVGQMGGLSGTTSVTVTLTDVNDNPPHFSRKSYQFSVPESLPVATMVAKIKALDSDV
GPNAEMEYRIVDGDGLGLFRITPDPDTQEGLITLQKGLDFETQSSYTLRVQASNRNVDLR
FLSLGPFSDTATVRLNVQNVDEPPVFSSPFSKMVISEAAKVGTTIGTISARDPDSTNSPI
RYSIDRNTDLERFFNIDAATGVISTAKPLDREVNAVHNITIFATESFDPLQVGKGIVLIT
VTDINDNAPAFAIEYETYLCESARAGQVIETISAVDRDEPQSGHRFFFSLTAEAAGNLNF
TLRDNKDNTASVLTKRGSFQRRHQTVYHLPVLIMDSGSPALSSTNTLSIRVCNCDPDGAP
QSCGSEKSMLSAGLSTGALVAILACILTLLVLVLLIITMQRRRKKEPLILDEERDVRENI
VRYDDEGGGEEDTEAFDMVALRNLNVVHESSCKTRRDVTPEFPTLFSSSRPPPDNGVFRE
FIWDRLKEADVDPSAPPYDSLQTYAFEGSGSAAESLSSLDSLSMDSEQNYEYLSDWGPRF
KKLADLYGHSDGGNLFAS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgaactgtccccccatgtggagtgtggttagcgtgttgactgtggtcgtaccc
ctttgggagatgggctgctctggcctgaccttgaactcagtgcccctgcatcggatcggg
acgtaccaaaggtgcggcgaaggggggacacaccacaggcagaggcgcagctgggtgtgg
aaccagttctttgtgctggaggagtacatgggggacgagccactctacgtgggcaagctg
cactcggatgtggacaagggtgaagggcgggtgaagtatgtgctcaatggcgagggagct
acctccatcttcaccatcgacgagaacacgggtgacatacatgccaccaagcgtctggac
cgcgaggagcaggcttactacacactccgggctcaggccaggcaccgcgacaccaacctg
cccgtggaaccagagtctgagtttgtcatcaaggtccaggatattaacgacaatgagccc
aagttcctggacgggccctactcagccagagtccccgagatgtccccggtgggcacgtct
gtggtgacggtggtggcgacagatgcggatgaccccacgtatggaaacagtgccagggtg
gtctacagtatcctcgagggccagccctacttctctgtggaaccaagaacaggcgtggtc
aggacggctctgcccaacatggaccgcgaggcgcgggaacagtatctgctcgtcatccag
gccaaggacatggtgggccagatgggaggactctccgggaccacctccgtcacggtgacg
ctcactgacgtcaacgacaacccaccacacttctctcgcaaaagttatcagttcagcgtg
cccgagtccctgccggtggccactatggtagccaagataaaggcgctagactcagatgtg
ggacccaatgctgagatggagtacaggatcgtggatggggacgggctagggttgttccga
atcacccccgacccagacacacaggagggcctcatcactctgcaaaagggcctggacttt
gagacccaatcgagctacaccctgcgtgtccaggcgtccaatagaaacgtcgacctgcga
ttcctctccctggggccgtttagcgacacagcgaccgtgcgcctcaacgtgcagaacgtg
gacgagccgcccgtcttctcctcgccattcagcaagatggtaatctcggaggcggcaaag
gtgggcaccaccattggaaccatctccgcacgcgacccagactccaccaacagtcccatc
aggtactctatagaccgtaacaccgacttggagcgcttcttcaacatagacgccgccacc
ggtgtcatcagcaccgccaagccgctggacagagaagtcaacgccgtacacaacatcacc
atcttcgccacggagagctttgacccactacaagtgggaaagggcatagttctgatcaca
gtgacggacatcaatgacaacgcgcctgccttcgccatcgagtatgagacctacctttgt
gagagtgccagagctggacaggtcattgagaccatcagtgctgtggaccgagacgagcct
cagagtggacaccgcttcttcttctccctgaccgccgaggctgctgggaatctcaacttc
accctgagagacaacaaagacaacaccgcttctgtgctgaccaagcgagggagcttccag
cgccgtcaccagaccgtgtaccacctccccgtcctcatcatggacagcgggagccccgcc
ctcagcagcaccaacaccctgtccatccgggtgtgcaactgcgaccctgatggggccccc
cagtcatgtgggagtgagaagtccatgctctcagcgggcctcagcaccggagccctcgtc
gccatcctggcctgcatcctcacactactggtgctggtcctgttgatcatcaccatgcag
cgacggaggaagaaggagcccttgatcctggacgaggagcgtgacgtgcgcgagaacatt
gtgcgctacgacgacgagggcggcggcgaggaggacactgaggccttcgacatggtcgct
ctgcgcaacctcaacgtggtccatgagagcagctgcaagacccgccgtgacgtcaccccg
gaattccccaccctcttctcgtcttcccggccgccgccggacaacggcgtcttccgtgag
ttcatctgggaccggctgaaggaggccgacgtggacccgtcggcgccgccctacgactcg
ctgcagacgtacgccttcgagggcagtggctcggccgcagagtccctcagctcgctggat
tcgctgagcatggactctgagcagaactacgaataccttagcgactgggggccacgcttc
aagaagctggcagacctctacggccacagcgacggcggcaacctcttcgcctcctag
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