Coregonus clupeaformis (lake whitefish): 121580588
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Entry
121580588 CDS
T08357
Name
(RefSeq) ATP-binding cassette sub-family F member 2-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121580588
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121580588
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GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_28
AAA_24
AAA_14
NACHT
VapE-like_dom
AAA_33
AAA_23
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
121580588
NCBI-ProteinID:
XP_041751483
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Position
14:complement(910916..927005)
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AA seq
611 aa
AA seq
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MPSDLAKKKAQKKKEAAKSRQKAKKPGEDGEGEGPEQGQQNGAESNGVDILTKEMDEFEL
KKTEARAVTGVLASHPNSTDVHVASLSLTFHGQELLQDTSLELNSGRRYGLIGLNGTGKS
MLLSAIGHREIPIPEHIDIYHLTREMAPSDKTALQCVMEVDEERIHLEKEAERLASEDSE
CEKLMELYERLEELDADKAEVRASQILHGLGFTAPMQQKKLKDFSGGWRMRVALARALFL
KPFMLLLDEPTNHLDLDACVWLEEELSQFKRILVLISHSQDFLNGVCTNIMHLHERKLKY
YTGNYDQYIKTREELEENQMKRFNWEQDQIKHMKNYIARFGHGSAKLARQAQSKEKTLQK
MVASGLTESVSNDKTLSFCFPPCGKIPPPVIMVQNVSFKYSDDQPHIYKNLEFGIDLDTR
VALVGPNGAGKSTLLKLLTGELLPTDGMIRKNSHVKIGRYHQHLTEQLELDLSPLDYMMK
CYPEIKEREDMRKIIGRYGLTGKQQVNPIRNLSDGQKCRVCFAWLAGQNAHMLFLDEPTN
HLDIETIDALADAINAYEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWNRDILAYKHHL
KKKIDKNSHGV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgacctggccaagaagaaggcgcagaagaagaaggaagctgccaaatcccgg
cagaaggccaaaaaaccaggagaggacggagagggagagggaccagagcaaggccagcag
aatggagccgaaagcaacggtgtggatatcctgaccaaggagatggacgagtttgagctg
aagaaaactgaggcacgggcagtgaccggcgtgctggcgtcgcaccccaacagcacagac
gtccacgtcgccagcttgtcgctcaccttccacgggcaggagctgctgcaggacaccagc
ctggagctcaactcgggacgccgctacggcctcattggcctcaacggcactggtaaatcc
atgttgctatcagccattggccaccgcgagatacctatcccagagcacattgacatctac
cacctgacccgcgagatggcgcccagcgacaagacggccctgcagtgtgtcatggaggtg
gacgaggagaggatccatctggagaaggaggcagagcgcctggcctccgaggactccgag
tgtgagaagctgatggagctgtacgagcgcctggaggagctggatgcagacaaggcggag
gtgcgagcctcccagatcctccacggtcttggcttcaccgcccccatgcagcagaagaag
cttaaggacttcagtggaggctggaggatgcgcgtcgctctggccagggccctgttcttg
aagcccttcatgttgctgctggatgagccaaccaaccacctggacctggacgcctgtgtg
tggctggaggaggagcttagccaattcaaacgtattctggtcctgatttcccattcgcaa
gacttccttaacggcgtgtgcaccaacatcatgcacttacacgagcgcaagctgaaatac
tacacgggcaactacgaccagtacataaagaccagggaggagctggaagagaaccagatg
aagaggttcaactgggagcaggaccagatcaaacacatgaagaactacatagcccggttt
gggcacggctcagccaagctggctcgtcaagcccagagtaaagagaagacgctgcagaag
atggtggcctctggcctgactgagagcgtttccaatgacaaaaccctgtcattttgtttt
cctccctgtgggaagattccccctccggtcatcatggtccagaatgtcagcttcaagtac
tctgatgaccagccccatatatacaagaaccttgagtttggcatagacctcgacacccga
gtggcccttgtggggcccaacggggccgggaagtccaccctgctcaaacttctcactgga
gagctcctccctactgacggtatgatccgcaagaactcccacgtcaagattggcagatat
caccagcatctaacagagcagctggaactcgacctctcacccctggattacatgatgaag
tgttacccagagatcaaggagagggaggatatgaggaagatcatcggccgctatgggctg
acgggcaaacagcaggtgaaccccatcagaaacctgtctgacgggcagaagtgccgggtg
tgctttgcctggctggctgggcagaatgcccatatgctcttcctggacgagcccaccaat
cacttggacatcgagaccattgacgccctggccgacgccatcaacgcgtacgaaggcggt
atgatgctggttagccacgacttcaggctcatccagcaggtggcccaggagatctgggta
tgtgaaaagcagaccatcaccaaatggaaccgggacatcttggcttacaaacaccatctg
aaaaagaagattgacaaaaattcgcatggtgtataa
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