Coregonus clupeaformis (lake whitefish): 121580593
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Entry
121580593 CDS
T08357
Name
(RefSeq) nucleolar transcription factor 1-A isoform X1
KO
K09273
upstream-binding transcription factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121580593
03021 Transcription machinery [BR:
cclu03021
]
121580593
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
121580593
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
121580593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
DUF4473
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121580593
NCBI-ProteinID:
XP_041751487
LinkDB
All DBs
Position
14:658434..685107
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AA seq
721 aa
AA seq
DB search
MNGSSSVSSASQTIRIKTEPVVDAWSKEDCLTLLERIRSLLPDSDAMKYKTTESHFDWEK
VCFGGFTGDMCKQKWAKVSTEVRKFRTMTELIVDAIEFVKNPYRGKKLKTHPDFPKKPLT
PYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQREKESFEKNMA
RFKEDYPELIEERKKSDLPEKPKTPQQLWYNHEKKTYVKLHPDVSQKELKEALRRQWSQL
SDKKRLKWISKALELQKDYAGCMRVYQEAHPDAEEHVKSVLTKAERQLKDKFDGRPTKPP
PNGYSLYCAELMVNMKDVPSTERMVLCSKQWKMMTQKEKDMFQKRCEQKKKQYEIDLQRF
LESLPEEERDRVMTEEKLGGSRLGMGGVGSPHRAKSPSAKVGLTKLQQERCREAELEHWV
HSGLTAKEKRDGKKRTKLPETPKTAEEMWQQGVMGDYLAKYRSDRKKAQSAMESAWKAME
KKEKIPWIKKAAEDQKRYEVQYRPVRELLEMRTAQSGAGQRKPKFEGEPRKPPVSGYQMF
SQELLTNGELNHFSLKERMVEIGKRWHKLSQSHKDKYKKLVEEQQIEYKAELEAWVKSLS
PQERAVYKEFSTTKRRSTTKVRGGPGAKVRVTAVKGKAVGARATAAGVGGGKRAMAYRAK
QDTSDSDDDDKTDSSDSDDDEESSGSSDSEDDDNDDDHDDDDQSEGSSSSSSEDSSDSDT
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcagcagcagtgtgtcctctgcctcccagaccatccggataaaaacagaacca
gttgtggatgcatggagtaaggaggattgcctcactcttttggagagaattcggagcctg
ttgcctgatagtgatgccatgaaatacaagaccaccgagtcccactttgactgggagaag
gtgtgctttggaggcttcaccggcgacatgtgcaaacagaagtgggcgaaggtgtccact
gaggtgcggaagtttaggactatgaccgagctcatagttgatgccattgagtttgtgaag
aacccttacagagggaagaaattgaagacacacccagacttcccaaagaaaccccttacg
ccgtatttccggttcttcatggagaagcgagccaagtatgccaagatccacccggagatg
agcaaccttgacctcaccaagattctgtccaagaaatacaaggagctcccagacaagaaa
aagcaaaagtacatcacagagtttcagcgagagaaggagtcctttgagaagaatatggcc
cgattcaaagaggactacccggagttgatagaggagagaaagaagtcggaccttcctgag
aagcccaagacgccccagcagctgtggtacaaccatgagaagaagacctacgtgaagctc
caccccgatgtgagccagaaggagctgaaggaggctctgaggagacagtggtcccagctc
tcagacaagaagagactcaaatggatcagcaaggccctggagctgcagaaagactatgcg
ggttgtatgagagtctaccaagaggcccatccagacgctgaagagcacgtcaagtccgtc
ctcaccaaagctgagcggcagctcaaggacaagttcgacggcaggccaaccaaaccaccg
ccgaatggttactccctatactgcgctgagctgatggtgaacatgaaggatgttcccagt
acggagcgtatggtgctgtgcagtaagcagtggaagatgatgacgcagaaggagaaggac
atgtttcagaaacgctgcgagcagaaaaagaagcagtacgaaattgacctacagaggttt
ctagagagtctcccggaggaggagagggaccgcgtgatgacggaggaaaagctggggggc
tcgcggctgggcatggggggtgttggcagccctcacagagccaagtccccctccgccaag
gtgggtctcacaaaactacaacaggagcgctgtcgcgaagctgagctggagcactgggtg
cactccggcctgacggcgaaagagaagcgcgacggcaagaagaggaccaaactccccgaa
acacccaagactgccgaggagatgtggcaacagggcgtcatgggagactacctggccaag
tacaggagtgaccgtaagaaggcccagagtgccatggagtcggcctggaaggccatggag
aagaaggagaagattccgtggatcaagaaggcggctgaagaccagaagcgatacgaggtt
cagtaccggcccgtgagggaattgttggagatgagaacagcccagtcaggagcaggccag
aggaaacccaagtttgaaggggagcccagaaagccaccagtgagtggctaccagatgttc
tcccaggagctgctgaccaacggcgagctgaaccacttcagcctgaaggagcggatggtg
gagatcggcaagcgctggcacaagctcagccagagccacaaggacaagtacaagaagctg
gtggaagaacagcagatcgagtacaaggccgagctggaggcctgggtcaagtctctctct
ccccaggagcgagcagtttataaagagttctccaccacgaaacggcggagcaccaccaag
gtgcgggggggcccgggggccaaggttcgtgtgactgcagtgaaggggaaggcggtaggt
gccagagccacagcagcaggggtcggggggggcaagcgggccatggcgtaccgggccaag
caggatacgtccgactcagacgacgatgacaagacggactcgtcagactccgatgacgac
gaagaatcatccggcagctccgacagcgaagatgatgataatgacgatgaccatgatgac
gacgaccaatccgaaggctccagcagctcttcctcagaggacagcagtgactcggacaca
gactag
DBGET
integrated database retrieval system
