Coregonus clupeaformis (lake whitefish): 121580597
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Entry
121580597 CDS
T08357
Symbol
riok1
Name
(RefSeq) serine/threonine-protein kinase RIO1 isoform X1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121580597 (riok1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121580597 (riok1)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121580597 (riok1)
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121580597 (riok1)
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: Other
RIO family [OT]
121580597 (riok1)
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-40S particles
Kinases
121580597 (riok1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
OspG_kinase
Motif
Other DBs
NCBI-GeneID:
121580597
NCBI-ProteinID:
XP_041751498
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Position
14:479671..495986
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AA seq
556 aa
AA seq
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MSMAQIVPGQFDDADESNSSVANTQPAEEMLALEGQIGGVSLDTLYHDSCEYDEEEDDDD
DDDDDDWDWNETGDLTKRYMANRTGMNHQANKQNPSNKSQKLSTPTDKALRKFEHKINLD
KLNYADSVINKVTVMQKQRDADTFRVKDKSDRATVEQVLDPRTRMILFKMLSRGVISEIN
GCISTGKEANVYHATTANGESRAIKIYKTSILLFKDRDKYVSGEFRFRHGYCKGNPRKMV
RTWAEKEMRNLIRLQTAGIPSPEPIMLRSHVLLMSFIGRDDIPAPLLKNASLSESKAREL
YLQVIQNMRVMYQEARLVHSDLSEFNMLYNDGDAYIIDVSQSVEHDHPHALEFLRKDCTN
VNDFFLKRGVAAMTLRELFEFVTDPSITSSNINLYLEKAMDITSERTAEERSNQDSVNEE
VFKNAYIPRTLTEVSHYERDVDAMANMKDDESSRNMQNDNILYQTVTGLKKDLSGVQTVP
ALLQDCDVEESSSSEDEDEEEDEDERKQESVGEDSQIDKKEKKKLAKEAQREKRKNKTPK
HVKKRKERVSKMKKGK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggcccagattgtaccaggacagtttgatgatgcggatgaatcaaacagtagt
gttgccaatacccaaccagctgaggagatgcttgcattagagggccagatcggtggagtt
agcctggacacactatatcatgattcgtgcgaatatgatgaggaggaggatgatgatgat
gatgatgatgatgatgattgggactggaatgagacgggagacttgacaaaacgctacatg
gctaatagaacaggaatgaatcaccaggcaaataaacaaaatcctagtaacaaatcacag
aaactgtcaacccccactgacaaggctctgaggaagtttgaacacaaaattaatttagat
aagctcaactatgctgactctgtgatcaacaaagtgaccgtgatgcagaaacaacgagat
gctgacacgtttcgagtgaaagacaagtcggatcgggctacagttgagcaggtgttggac
ccacggacgcgaatgattctgtttaagatgctcagcaggggtgtcatttcagagatcaat
ggatgtatcagcacaggcaaagaggcaaatgtttaccatgcgaccactgccaatggtgag
agcagagccatcaagatctacaagacctccatcttactgttcaaggaccgtgacaaatat
gttagtggagaattcaggttccgccacggctactgtaaaggaaaccccaggaagatggtg
cgaacctgggccgagaaggagatgaggaacctcatcaggttacagacggcaggcatccca
agtccggagccaatcatgctgcgtagccacgtgctcctcatgagtttcatcggcagggat
gacatacctgctcctcttttgaagaacgcttccctgtccgagtccaaagcgcgtgagctg
taccttcaggtgatacagaacatgagggttatgtaccaggaggcccggctggtccattcg
gacctcagtgagttcaacatgctgtacaacgacggtgacgcctacatcatcgacgtgtcc
cagtctgtggagcacgaccacccccacgctctggagttcctgcgcaaagactgtaccaat
gtcaatgacttcttcctgaagcgcggcgtcgcggcgatgacgttgcgcgagctctttgag
tttgtcaccgatccctccatcaccagcagcaacatcaacctctacttggaaaaggcaatg
gacattacttctgagaggacggcagaggagaggtccaatcaggatagtgtgaatgaggag
gtgtttaagaatgcgtacatcccgcggacacttacagaagtgagccactacgaacgtgac
gtggatgccatggcaaacatgaaagacgacgagtcctcacgcaacatgcagaatgacaac
atcctctaccagacagtgacgggcctgaagaaggatctgtctggagttcagacggtacct
gccctgctgcaggactgtgatgtggaggagagctcaagttcagaggatgaggatgaggaa
gaagatgaagatgagcgcaaacaggagtctgtgggagaagactcccagattgacaagaag
gagaagaagaaattggccaaggaggcccagagggaaaagaggaaaaacaaaacaccgaaa
cacgtgaagaagagaaaggagagggtttcaaagatgaagaaaggcaaatag
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