Coregonus clupeaformis (lake whitefish): 121580619
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Entry
121580619 CDS
T08357
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1-like isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121580619
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
121580619
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_22
TIP49
AAA_5
RuvB_N
Mg_chelatase
IstB_IS21
PhoH
AAA_33
AAA_18
DUF815
AAA_17
AAA_14
AAA_28
nSTAND3
AAA_lid_PRS2_C
AAA_7
Motif
Other DBs
NCBI-GeneID:
121580619
NCBI-ProteinID:
XP_041751524
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All DBs
Position
14:4816141..4847819
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AA seq
720 aa
AA seq
DB search
MFSLSTTVQPQVTVPLSQLINALQYLKTAVGSSSSATAEPQHREHASEQDLQSTEPAWSL
RDLGLSDLGVGQMDELASAMLPRLSQQGALSSSSPSQQAWRTSHLSSHSFFHNKHGFSGG
KMGTSYPVFCRQVPSPLQAICTEFHYWPVWVQNRGFKTLGKHKRLQAGFERPMEPDGFTP
SFMKGLLTRDKGLEVETLDKLLKNKNIPDGQQDSFKTGFAEGFLKSQALTQRTQDSLRRT
RLVLLVLLLLGFYGLSKTPFLSVRFRTTSGLDSAVDPVHMKNVTFEHVKGVEEAKNELQE
VVEFLRSPEKFTVLGGKLPRGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFV
GVGASRIRNLFKEAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPN
EGVIIIGATNFPEALDNALIRPGRFDMQVTVPKPDVKGRTEILNWYLRKIKVDPDIEAGI
IARGTVGFSGADLENLVNQAALKAAVDGKDMVTLKELDFAKDKILMGPERRSVEIDLKNK
EITAYHESGHAIVAYYTKDAMPINKATIMPRGPTLGHVSMLPDDDRWSETRAQLLAQMDV
SMGGRVAEEIIFGNEFITTGASSDFDAATKIAKMMVTRFGMCERLGVMTYADQTKQSPKT
QAAIEHEVRKLLKDSYERARVLLKSHAKEHQSLARALLQYETLDAREIKMVLEGKALETR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttgtcaacaacggtccaaccacaggtcactgttcccctgagtcaactgatc
aatgccctccaatacctgaagaccgcagtgggcagcagcagcagtgccactgctgaacct
cagcacagagagcatgcctcggaacaggacttgcagagcacagagcccgcatggagcctt
agggaccttggcctgtctgacctgggcgtggggcagatggacgagctagcgagcgctatg
ttaccacgtctgagtcaacagggggcgctgtcctcatccagccccagccaacaggcctgg
aggacctcccacctctcctcacattccttcttccacaacaagcacgggttctctggtggt
aaaatgggcacgtcctaccctgttttctgcagacaggtcccttcccctcttcaggccatt
tgtacagagttccactattggcctgtgtgggtccagaacagaggctttaaaactctaggg
aaacacaagcgactgcaggcaggctttgagcgtccgatggaaccagatggctttacaccc
tcctttatgaagggcctcctgacgcgtgataaggggttggaggtggaaaccttggacaag
ctcctgaagaacaagaatattcccgatgggcagcaagattctttcaagaccgggtttgct
gagggcttcctgaaatcccaagctctgacacagcgcacacaagactctctgaggaggacg
aggctggtcctgctggttctgctactgctgggattctacggcctctcaaagacccccttc
ctatcggtgcgattccgaaccacatcaggcctggactcggcggtggaccctgtccacatg
aagaacgtgacgtttgagcacgtcaaaggggtggaggaggccaagaacgagctgcaggag
gtggtggagttcctccgcagcccagagaagttcaccgtcctcggagggaaactgccgaga
gggatcttgctggttggccctcctggcactgggaagactctgttggccagagccgtggct
ggagaggccgacgtccccttctattatgcctcaggctctgagtttgatgagatgtttgtt
ggggttggagccagtcgcatcaggaacctcttcaaggaagctaaagcaaacgccccgtgt
gtgatcttcattgacgagttggacagcgtcggagggaagagaatcgagtctcccatgcac
ccttactccagacagaccatcaaccagctactggctgagatggacgggttcaaaccaaac
gaaggggtcatcatcattggagcaacaaatttccctgaggctttggataacgctctgatt
cggccaggacgttttgacatgcaggtcaccgtccccaagccagacgtgaaggggcgcaca
gagatcctcaactggtacctaaggaagatcaaagtagaccctgacattgaggctgggatc
atcgccaggggaacagtgggcttctccggggcagacctggagaacctggtcaaccaggcg
gctctgaaggcggcggtggacggcaaagacatggtgaccctcaaagagctggatttcgcc
aaggacaagatcctcatgggcccagagaggaggagtgttgagatagacctgaagaacaag
gagatcacggcctaccacgagtcaggccacgctatcgtggcgtactacaccaaggacgcc
atgcccatcaacaaggccaccatcatgcccagaggacctacgctgggtcatgtgtccatg
ctaccggacgatgaccgctggagcgagacgcgtgctcagctgctggcccagatggacgtc
agcatgggaggccgcgtggcagaggagatcatatttggcaatgagttcatcaccactggt
gcatcaagtgactttgatgctgccaccaaaattgcaaaaatgatggtgaccagatttggt
atgtgtgagaggctgggtgtcatgacctacgctgaccaaaccaagcagagcccaaagaca
caggctgccatcgaacacgaagtcaggaaacttttaaaggattcgtacgagcgggccagg
gtgctcctcaagtctcacgccaaagagcaccagagcctggccagggccctgctgcaatac
gagacactggacgccagagagatcaagatggtcctggagggcaaggccctggagaccaga
tga
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