Coregonus clupeaformis (lake whitefish): 121580704
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Entry
121580704 CDS
T08357
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu00514
Other types of O-glycan biosynthesis
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121580704
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121580704
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121580704
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
121580704
Glycosyltransferases [BR:
cclu01003
]
O-Glycan biosynthesis
O-linked Gal type
121580704
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
121580704
NCBI-ProteinID:
XP_041751632
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All DBs
Position
14:complement(10005052..10013011)
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AA seq
620 aa
AA seq
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MPFEIVGFGLLFVILTGILPYNTCTEDLITEPLEPVLPESSLLKPKVLISILARNAEHSL
PYFLGCIDGLEYPKDRIAICAAADHSVDNTTAMLQEWIRGVQSQYHSVKWTHVEEPSSHV
GELGPKHWPNSRFTHVMKLKQAALRSARALWADYILFVDTDNLLTNRRVLTEMMAENLTV
VAPMLESRVLYSNFWCGVTPQGYYKRTPEYIPIRNWKRQGCFAVPMVHSTFLVDLRRSAT
RALVFHPPHHDYTFPLDDIMVFAFSARRADVQMYICNREHYGYLPLPLKQEQSLEEEVES
FSHTMTEALIDYLMKPSKYMHHTPKPLEKMGFDEIFLINLKRRIDRRDRMLSTLSVLGID
ITLTEAVDGKALNSSQLQAMGIDMLPGYKDPYSGRVLTRGEIGCFLSHYNIWKQVVEQGL
QLVLVLEDDVRFEPRFRSRLVTIMENVDRVGLDWDLIYVGRKRLQVKQPERWVEGVSNLV
HPDYSYWTLGYALSLQGAKRLLGARPLGKMLPVDEYLPVMFNKHPREEYMAQFEQRDLLA
FSVEPLLLFPTHYTGEPGYFSDTETSTIWDDEATTTDWDRQNTQRSSKQDGQGRPMPPGI
VKEGGGVPPPSSASKQRDEL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttgaaattgtgggtttcggattgcttttcgtgattttgaccgggatactccca
tacaacacctgtacagaagacttgataactgaacccctagaacctgtcctgcctgagtct
tcgttgctgaagcccaaagtattgatcagtatccttgcgcgcaatgcggagcacagtctt
ccctactttttggggtgcatcgacgggctggagtatcctaaggatcgtatcgccatctgt
gctgctgcagaccatagtgtggacaacaccacagccatgctgcaggagtggatcagaggg
gtgcagagccagtaccactctgtgaagtggacacatgtggaggaaccaagctcgcatgtg
ggtgagttggggccgaagcactggcctaactctcggttcacccacgtgatgaagctaaaa
caggctgctctcagatcagccagggctctctgggctgattacatactgtttgtggacact
gacaacttgctgaccaaccggcgggtgctgactgagatgatggcagagaatctaacggtg
gtagcgcccatgttggagtcccgcgtcctctactccaacttctggtgtggcgtgacccca
cagggttactacaagcgcacccctgagtacatccccatcaggaactggaaacgccagggc
tgctttgctgttcccatggtgcactctaccttcctggtggacctgaggcggagcgccacc
cgggcgctggtcttccatcctccacaccacgattacaccttccccctggatgacatcatg
gtcttcgccttctctgcacggcgggcagatgtgcagatgtacatatgtaacagagagcat
tatgggtatctgccactgcccctgaagcaagagcagagtctggaggaggaggtggagagc
tttagtcacaccatgactgaggctctgatcgattacctcatgaagccgtccaaatacatg
caccatacacctaaacctctggaaaagatgggatttgatgagatctttctgattaatctg
aagcgtcgcattgaccggcgggatcgaatgctgagcaccctttccgttctgggaatcgat
atcacactgacagaggcggtggatggcaaagccctgaactcctcccagctgcaagcgatg
ggcatagacatgttgcctgggtacaaagacccgtattcggggcgcgtactgacgcgaggg
gagatcggctgcttcctcagtcactacaacatctggaaacaggtggtggaacagggactg
cagcttgtgctggtgctggaggacgatgtgaggtttgagccacggttccgcagcagactg
gtgaccatcatggagaacgtggaccgagtgggactggactgggatctgatctacgtgggg
cgtaaacggctgcaggtgaagcagccggagcgctgggtggagggggtcagtaacctggta
caccctgactattcctactggaccctgggttacgccctctccctgcagggggccaagagg
ctcctgggagcccggcccctgggcaagatgctacctgtggatgagtacctgcctgtcatg
ttcaacaagcacccaagggaggagtacatggcccagtttgagcagagggacctgctggcg
ttctctgtggagccgctgctcctcttccccacccactatactggcgagccgggctacttc
agcgacacagagacctccaccatctgggacgatgaggccacaaccaccgactgggaccgg
cagaacacccagcgaagcagcaagcaggacggccagggacggcctatgcccccaggcatc
gtcaaggaaggaggaggcgtgcccccaccctcgtctgccagcaaacaaagagatgaactc
tga
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