Coregonus clupeaformis (lake whitefish): 121580706
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Entry
121580706 CDS
T08357
Name
(RefSeq) vesicle-trafficking protein SEC22b-B-like
KO
K08517
vesicle transport protein SEC22
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121580706
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121580706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121580706
Membrane trafficking [BR:
cclu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
121580706
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
IMD
Motif
Other DBs
NCBI-GeneID:
121580706
NCBI-ProteinID:
XP_045080601
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Position
14:10030470..10039795
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AA seq
215 aa
AA seq
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MVLLTMIARVADGLPLAASMQEDEQSGRDLQHYQSQAKQLCRKLNAQSPNRCTLEAGVMS
FHYVIEHGVCYLALCEAVFPKKLVFGYLEDLQTEFHEQHGKKVPTVSRPYSFIEFDTYIQ
KTKKNYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDTKASNLSSLSKKY
RSDAKYLNTRSTYAKIAAGAVFFITLIVYVRFWWI
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggttttgctgacaatgatcgctcgggtagcagatggactgccgcttgctgcatcgatg
caagaagacgagcagtcaggaagagacttgcaacactaccagagccaggctaagcagctg
tgtcgtaaactcaatgcccagagccccaacagatgtactctggaggctggggtcatgtcc
ttccactatgtaatagaacatggcgtgtgctacttggccttgtgtgaagctgtgtttccc
aagaagctggtctttgggtacctggaagacctccagacagaattccatgagcagcatgga
aagaaagttcccacagtctccaggccgtactctttcattgagtttgacacgtacatccag
aagacaaaaaaaaactacattgacagcagggcacggaggaacctgggcagcatcaacaca
gaactgcaggatgtccagcggatcatggtggcaaacattgaagaggtcctgcaacgagga
gaggccctatcggctctcgacaccaaagccagcaatctgtccagcctttcaaagaagtac
cgcagcgatgccaagtacctcaacacccgatccacctatgccaagatagcagctggggca
gtcttcttcattacacttatcgtctatgtgcgtttctggtggatctga
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