Coregonus clupeaformis (lake whitefish): 121580727
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Entry
121580727 CDS
T08357
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121580727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121580727
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
121580727
Prokaryotic type
Archaeal type
TFB
121580727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
121580727
NCBI-ProteinID:
XP_041751675
LinkDB
All DBs
Position
14:complement(10782921..10794625)
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AA seq
318 aa
AA seq
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MASTSRGDVLALPKVQCPNHPDAMLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNE
KDTKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAD
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacgagccgtggagacgtccttgcccttcccaaggtgcagtgccccaaccac
ccagacgccatgctggtggaagactacagagcaggggacatgatctgccccgagtgtggc
cttgtagtgggtgacagggtgattgatgtgggttcagagtggaggaccttcaccaacgag
aaagacaccaaagacccgtccagagtgggcgacgcccagaatccactcctcaacggggga
gacttgaccaccatgatcagcaagggaacaggcgcggcgagttttgacgagttcggcaac
tccaaataccagaaccggcggaccatgagcagttcagaccgcgccatgctaaacgccttc
aaagagattaccaccatggccgaccggatcaacctaccaaggaacatcatagaccgaaca
aataacttatttaagcaagtgtacgaacagaagagcctgaaggggcgggccaacgatgcc
atcgcatcagcctgcctgtacatcgcctgcagacaagagggtgtgcctcggacatttaaa
gagatctgcgccgtgtcccgcatctccaagaaggagattggccgctgcttcaagctgatc
ctcaaggccctggagaccagcgtggacctcatcaccaccggagacttcatgtcccgcttc
tgctccaacctgggcctgcccaagcaggtgcagatggcggccacctacatcgcccggaag
gcagtggagctggacctggtgcctggcaggagccccatctccgtggccgccgccgccatc
tacatggcctcccaggcctctgccgagaagaagacccagaaagagattggagacatcgcc
ggtgtggcggatgtcacgatcagacagtcgtacagactcatctacccccgcgctgccgac
ctctttccccctgacttcaaattcgacacccccgtggacaaactgccccagctgtga
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