Coregonus clupeaformis (lake whitefish): 121580728
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Entry
121580728 CDS
T08357
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D-like
KO
K22038
volume-regulated anion channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121580728
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121580728
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_5
LRR_9
LRR_EndoS
LRR_LRWD1
ECPIP
Motif
Other DBs
NCBI-GeneID:
121580728
NCBI-ProteinID:
XP_041751676
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Position
14:10801049..10808140
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AA seq
848 aa
AA seq
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MFTITELASLNDIQPTYRILKPWWDVFMDYLGVVMLMLSIFAMTMQITKDQVACLPCLEE
EAAGPNSCTSQSPQETASSAVTIKTLLATPMATEDLPDSAVHEIHNTQPIIVKRESKMQQ
PEPTGIRTNLDYQQYVFVNQMCYHVALPWYSKYFPYLSLIHTLVLMVSSNFWFKYPKTSS
KIEHFVSILGRCFESPWTTKALSETACEDSEENKQRLTGTTSAQRELSQETKDENAANSS
TPMLGNTGVKFSADKPVAEAPSMTILDKKDGEQAKALFEKVRKFRAHVEDSDFIYKLYVA
QTVVKTVKFILILSYTSTFIAAIEFHHTCEPNIKDLTGYKKFFCTHNMAFMLRKLLLSYM
ALILIYGMVCLYSLHWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLY
SKRFGVFLSEVSENKLREISLNHEWTFEKLRQLVTRNAQDQQELHLFMLSGLPNAVFDLT
DLEILKLELIPEVRFSAKVSQMTNLQELHLCHCPAKVEQTAFVFLRDHLRCLHVKFTDVA
EIPAWVYLLRSLRELNLVGNLSSENNKMIGLECMRDLKHLKTLYLKSNLTKMPSNLTELS
PHLIKLVVHNDGTKLLVLNSLKKMTNLADLELHNCELERIPHAIFSLTNLQELDLKSNNI
RTIEEVISFQHLKRLTCLKLWHNKIITIPASIGQVKSLESLHLSHNKLETLPPALFHLPK
LRHLDVSHNSITVIPPDLGLLQNLQHFAINANKVEVLPKQLFRCTKLKFLCLSNNGLTNL
PETVGQLVHLAQLELKGNCLDRLPSLLGNCHLLRKNSLIVEDHLFDTLPVEVKESISRET
NVSFASGL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccatcactgagttagcgtcgctgaacgacatccagccaacctaccgcatccta
aaaccatggtgggacgtcttcatggactacctgggggtggtcatgctcatgttgtccatc
ttcgccatgacgatgcagatcacaaaggaccaggtggcgtgtcttccatgcctggaggaa
gaggcggcagggccaaactcttgcacatcccaaagtccacaagaaaccgcctcatcagca
gttaccataaagacattgcttgctacaccaatggccactgaagatctaccagacagtgca
gtacacgagatccacaacacccagcccatcattgtgaagcgagagagcaaaatgcagcaa
cccgagcccacagggatccgaaccaacttagattatcagcagtacgtctttgtcaatcaa
atgtgttaccatgttgccttgccctggtactcaaagtacttcccgtacctctccctcatc
cacacccttgtgcttatggtcagtagtaacttctggttcaaataccccaagacaagctca
aagattgaacactttgtgtccattctcggacggtgctttgagtctccgtggactacaaag
gctttgtccgagacagcctgtgaggattctgaggagaacaaacagagactgactggcacc
acttcagcacagagagagttatcacaggaaactaaagatgaaaatgctgccaactcatct
acccctatgcttgggaatacaggagtcaagttctcagcagataagcctgttgctgaggcc
ccaagtatgactatcctggacaagaaagatggagagcaggcgaaggctctttttgagaag
gtgaggaaattccgcgctcatgtggaggatagcgatttcatctacaagctctatgtagct
cagactgtggtcaaaacggtcaagttcattttgattctgtcctatacgtcaacatttatt
gctgccatcgaatttcaccacacatgtgagcccaacatcaaagacttaaccggatataag
aaattcttttgtacccacaacatggctttcatgctgagaaagctcctcctcagctacatg
gccctcatattgatctatgggatggtgtgcttgtattccctccactggctgttcaggcgc
ccccttaaagagtactcatttgagaaagtcagagaggagagtagcttcagtgacattcct
gacgtgaagaacgactttgcgttccttctgcacatggtcgatcagtacgaccagctgtat
tccaaacggtttggtgtcttcctctcagaggtcagcgagaacaagctgagggagatcagt
ctgaaccacgagtggacattcgagaagctcagacagcttgtgacccgaaatgcccaagac
cagcaggagctccacctcttcatgctctctggtctccccaatgcagtgtttgacctcacc
gacctggaaatacttaaactagagctaattcctgaggtcaggttttcggcaaaggtatcc
caaatgacaaatctgcaggagctgcacctctgccactgccccgccaaagttgagcagact
gcctttgtctttctccgtgaccacctccggtgccttcatgtcaagttcacagacgtcgct
gagatcccagcatgggtttatttgttgaggagtttgagggagctaaacttggtagggaat
ttaagctcagaaaacaacaaaatgataggactagagtgcatgcgtgatttgaaacatctt
aagacattgtatctgaagagcaacctcaccaagatgccctccaacctcactgagctgtct
ccacacctgatcaaactggtggtgcataacgatggtactaaactacttgtactgaacagc
ttaaagaagatgacaaacctcgctgatctggagctgcacaactgtgagctggagaggatc
cctcatgctattttcagcttaaccaacctccaagagctggacctcaaatccaacaacatt
cgcaccatcgaggaggtcatcagctttcagcacctcaagaggttgacctgcctcaaattg
tggcacaacaaaatcatcaccattccagcctccataggccaggtcaagtctttggagtca
cttcacctttcgcacaacaaactggagacgctcccgccggcgctgttccacctccccaag
ctgaggcacttggatgtcagtcacaactccatcacggtgatcccgccggacttgggtctc
ctgcagaacctccagcacttcgccatcaatgcaaacaaggtggaggtgctgcccaagcag
ctgttcaggtgcaccaagctgaagttcctgtgtttgagcaacaatggcctcaccaacctg
cctgagacagtgggtcagttggtgcatcttgctcagctggagctgaaggggaactgtctg
gaccgccttccctcactgctggggaactgccaccttctacgtaaaaacagcctcattgtt
gaggaccacctttttgacactttgcctgtagaggtaaaggagagcattagtcgggagacc
aatgtgtcctttgcgagtggcttatag
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