Coregonus clupeaformis (lake whitefish): 121580747
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Entry
121580747 CDS
T08357
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121580747 (pif1)
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121580747 (pif1)
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121580747 (pif1)
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
121580747 (pif1)
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
121580747 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
DEAD
AAA_22
UvrD_C_2
Herpes_Helicase
Mg_chelatase
RsgA_GTPase
ABC_tran
AAA_16
AAA_7
PhoH
AAA_5
Motif
Other DBs
NCBI-GeneID:
121580747
NCBI-ProteinID:
XP_041751697
LinkDB
All DBs
Position
14:complement(11255145..11267154)
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AA seq
660 aa
AA seq
DB search
MSPHIVTMLQGDDGAQLECSVVVERLNSSGQATKRQVIRKAAVLLGRNEFQEIILRVHDG
KIPQSYTLKEFQLFTRFAKDGKCTVKLLPENIQVLISDCPPHLLNIFLKTLSIKHQAWQT
SKPMTDREKLKACLPRSFETISPLQRKDVQKANELRSKVNTPLLSKGLVVRTGNKMTGGP
QGQQVKRPRTDCDSSPVKALHPSKKPILSLPTARKLNKEQAAVLSAVLSGKNVFFTGSAG
TGKSFLLKRIVGSLPPKSTYATASTGVAACHIGGITLHNFAGIGSGSAPLEQCIELAQRP
GVLQHWTSCRHLIIDEISMVEAQFFDKLEAIARSLRRSTEPFGGIHLIVCGDFLQLPPVS
KGKDKATFCFQSRSWRKCIQLNMELTEVRRQTDQSFISLLQAVRVGRVTEEVTAKLMGSA
YHKIERDGILATRLCTHKDDVELTNDNKLQQLPGSVRVFEAVDSDPALVKIIDTQSPVSR
LLQLKVGAQVMLTKNLDVQRGLVNGARGVVVDFQPGKLGLPRVRFLCGTTEVLKPERWMF
KAGGGLYLSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRAKSLEGL
RVMDFDPRVVRANPDVLHFYSKLRKERLLLQASMDEFVGKSNKENRWYIHHGHAHCQQLC
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcacattgttacaatgttacaaggggacgacggtgcccagctcgagtgcagt
gtcgtggtggagcgcctgaactcctctggccaggccaccaaacgccaagtcatccggaag
gcagctgttcttctcggtcgcaacgagttccaggagataatcctgcgcgtgcacgacggt
aaaataccccaaagttacacgctcaaagagttccagctctttacccggtttgccaaggat
ggcaagtgcaccgtcaaactgctccccgaaaacatccaggtgctcatctctgactgcccg
ccccacctattaaacattttcctgaagaccttgagtatcaaacaccaggcctggcagact
agcaagcccatgactgaccgagagaagctgaaagcctgtctgccccgcagcttcgagacc
atcagcccattacagcggaaggatgtacagaaggccaatgagttgaggagcaaagtgaac
acgccattgctctctaaaggcctggtagtgaggactggtaataagatgactggaggacca
cagggacagcaggttaagagaccaaggacggactgtgactcaagcccagtgaaggcactc
cacccaagcaaaaagcccatcctgtctctaccaacggcacgcaagttgaacaaagaacaa
gccgctgtcctcagcgctgtgttgagtgggaagaatgttttcttcaccggcagtgcaggc
acagggaagtccttcctgttgaagaggattgtgggctcgctgccgcccaaaagcacctac
gccacggccagcacgggcgtggcagcgtgtcacattgggggaatcacgctacacaatttt
gctggtatcgggtcaggctcagcccctctggagcaatgtatagagctggcccagaggcct
ggggtcctgcagcactggaccagctgtcgccacctcatcatcgacgagatctccatggtg
gaggcccagtttttcgacaagctggaggccatagccaggtctctgaggaggtccacagag
ccgtttggaggcatccacctgatagtgtgtggcgacttcctccagctgcccccggtctcc
aagggaaaggacaaggccacgttctgcttccagtctagaagctggcggaagtgcatccag
ctgaacatggagctgactgaggtgcgcagacagacggaccagtccttcatctccctcctg
caggcagtgagggtgggcagagtcacagaggaagtcactgccaagctgatggggagcgcc
tatcacaagatcgagcgggatggtatcctggcaaccaggctttgcactcacaaggatgac
gtagagctcacaaatgacaacaagctccagcagctgccagggtcagtgcgggtatttgag
gctgtggacagcgaccctgcgctggtgaagatcatagacacccagagtcccgtcagcagg
ctgctgcagcttaaagtgggcgctcaggtcatgctaacaaagaacctggacgtccaacgt
ggcctggtcaatggggctcgaggtgtcgtagtagattttcagccggggaaactagggctc
ccacgcgtacgtttcctgtgcggcaccaccgaggtgctgaagccagagcggtggatgttc
aaggccggaggcgggctctacctgagccgccagcagctgccactcaaactggcctgggcc
atctccatccacaagagccagggcatgacgctggactgtgtggaaatctccctggcgcgg
gtgttcgagagcgggcaggcctatgtggctctgtctcgggccaagagcctggaggggcta
agggtcatggactttgacccccgcgtggtccgtgccaaccctgacgtgttgcacttctac
agcaagctgaggaaagagaggctactgttgcaggcctctatggatgagtttgtgggaaaa
agtaacaaggagaaccgttggtatatacatcatggacatgcacactgccaacaactttgt
tga
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