Coregonus clupeaformis (lake whitefish): 121580755
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Entry
121580755 CDS
T08357
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2 isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121580755
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121580755
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF7310
DALR_1
Med4
Motif
Other DBs
NCBI-GeneID:
121580755
NCBI-ProteinID:
XP_041751710
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Position
14:complement(11617464..11664109)
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AA seq
966 aa
AA seq
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MRHRYAGAVYQHQIPDEEQGSAQSRDPNPVSPVFSLPPPPPSFRERSTTTSHYQNHHELP
CLSQPSPRGNHACQPQHREPPPLTSYDIAQRPSNRVCEPEGQPAHLKQNLWAAVGSQPQS
EQPVIQSCHCSFSEKANLSHQRQPLTHPPQPSPSLPPPPTSSSLLFLQESNRGEHLQSSA
NYQQASIVEHCRGEGGGLRDQKQLLQQHSQRLRHRDPSPETIRANSQKGRTVNVCESIEA
NQRAYESQTQDLQQLQQLPLLRAQQQLLVGSSLPINYCANGSGELCRNNQASLLQQHQQQ
QDALGLCPQRPQHCDQDCNKPGRTNQANLPQHHCCDSRVSPPTQPYGENSSATGSSSKSS
PNYGSSYHLWPESPHKGEERILIEHHQAATEQKKLSHAGSKPSLSESSGRLPQIAMNTCK
YNGGVVRPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVISKGNGEDPSKASNESLVRD
GNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYGKESS
YSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVCA
IHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASS
RSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDTQEVTSNF
LGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKH
VHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQKL
RSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEEKLDSVTGSLQ
ALPCLISQAINQQQQEFLDSFLHRFRPTSLGSERSERSERSERSWTSTARRRRSPSTAPH
TSSDSG
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcgatacgcgggagctgtctatcagcaccaaatcccggacgaagagcaaggc
agcgcgcagagccgagacccaaacccagtctctccagttttcagtctgccgccccctcct
ccgtctttcagagagcgttcaactaccacctcacactaccagaaccaccacgaactgcct
tgtctgagccagccctctccgagaggtaaccatgcctgtcagccgcagcaccgcgaaccc
ccacctctgacaagctacgacatcgcccaacgaccgtcaaaccgggtctgtgaacccgaa
gggcagccagcgcacctgaagcagaacctttgggccgcagtcggctcgcagccgcagtca
gaacagcctgttattcagagctgccactgcagtttttccgagaaggcgaacctttctcac
cagcgccagcccctcactcacccgccgcagccctccccatctttgccgccgccgccaacg
tcgtcctctttgctgtttttgcaggaatctaatcgcggggaacatttacaaagcagtgcc
aattaccaacaggcgagcatcgtggaacactgcaggggagaaggaggagggctccgagac
cagaagcagttgttgcagcaacacagtcaaagactccgacacagggacccctcccctgaa
acaatccgagcaaactcgcagaaagggcgcactgtaaatgtatgtgagtcaatcgaggct
aatcagcgagcatacgagtcccagactcaggacctgcagcagctacagcaactcccacta
ttgcgagctcaacaacagctactggtggggagcagcttgcctatcaactactgcgccaac
ggctcaggagagctatgtaggaataaccaggcatcactgctgcaacagcatcagcagcag
caagacgcactggggctatgtccccagcgtccgcagcactgtgaccaagactgcaataag
ccggggaggacgaaccaagccaacctgccgcagcaccattgctgtgactcccgtgtaagc
ccaccaacgcagccgtacggggagaactcgtctgcgactggcagcagcagcaagagcagc
cctaactacggctccagctatcacctgtggcccgagagcccgcataagggagaagagcgg
atactaatcgagcatcatcaggcagccactgagcagaagaagctgagccatgctggatcc
aagccctccctctccgagagcagcggccgactccctcagatagccatgaacacctgcaag
tacaatggcggcgtagtgagaccactgggcagcctggcgtcttcgcggcgcaacctagca
gagctcgactcggagacgcagcccctccagacgctgcacagctccggcctggaggtggtg
atatccaagggcaacggcgaggaccccagcaaggcgtccaacgagagcctggtcagggac
ggaaacggtgctcctgtgaagaagaacaaggacatcggctataggctcggccaccggagg
gcactctttgagaagcggaagagactcagtgactacgccctcatcttcggaatgttcggg
atcgtcgtcatggtgactgagactgaactgtcctggggagtttacggcaaggaatcttcg
tactcatttgcactgaaatgccttatcagcctttccactgttatattgcttggtcttata
ataatgtaccatgcccgggaaatccagctgtttatggtggacaatggggcggacgactgg
aggatagccatgacgtacgaacgcatcttcttcatcgtgctggagctgctggtgtgcgcc
atccaccccatcccaggccattaccgcttcacgtggacggcgcggatcgccttcacctac
actccgtcgacggccaacgccgacgtggacatcatcctctccatccccatgttcctgcgc
ctctacctgatcggccgagtcatgctgctgcacagcaagctcttcacggatgcctcgtca
cgcagcatcggcgccctcaacaagatcaacttcaacacgcgcttcgtcatgaagacgctc
atgaccatctgccccggcaccgtgctgctggtcttcagcatctcctcgtggatcatcgcc
gcctggacggtgcgagtctgcgagagatatcatgacacacaggaagtgaccagtaacttc
ctgggagccatgtggctcatctctattaccttcctttcgattggctacggagacatggta
ccgaacacgtactgtgggaaaggtgtatgtctgcttacagggatcatgggagctggctgc
actgcgctggtggtcgccgtggtagccaggaagttggagttgaccaaggctgagaagcat
gtccacaacttcatgatggacacacaactctgcaaacgagtaaagaacacagctgccaat
gtactcagggaaacatggctcatctacaaacacactaagttggtcaagaagatcgatcac
gccaaggtgcggaaacaccagcgcaagtttctacaggccatccatcaagctcagaaactg
cgcagtgtgaagatggagcagaggaaactcaacgatcaggccaacacgctagtggacctg
gctaagacccagaacgtgatgtatgacctggtgtcggagctgcaggagcgcagcgaggaa
ctggacaagcgcatcggcatgctggaggaaaagctggactcggtgacgggcagcctacag
gcgctgccctgcctcatctcccaagccataaaccagcagcagcaggaattcctggacagc
ttcctgcaccgcttccggcccacctcgctgggctcagagcgctcggaacgttcagaacgt
tccgagcgctcctggacctccaccgcccgccggcgtcgttcgccgtcaacggcgccgcac
acctcctccgacagcggctag
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