Coregonus clupeaformis (lake whitefish): 121580799 Help Entry 121580799         CDS       T08357                                  Name (RefSeq) LOW QUALITY PROTEIN: roquin-1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cclu03000]     121580799    04121 Ubiquitin system [BR:cclu04121]     121580799 Transcription factors [BR:cclu03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     121580799 Ubiquitin system [BR:cclu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     121580799 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK zf_CCCH_4 Prok-RING_4 FYVE NS3_helicase_C Baculo_IE-1 zf-RING_6 RING_XB3-XBAT31 Motif Other DBs NCBI-GeneID:  121580799 NCBI-ProteinID:  XP_041751772 LinkDB All DBs Position 14:complement(13134783..13179556) Genome browser AA seq 1117 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IEQLPVNTALLQLVGGQVPKVQPVALITSPEDSQHYEEARHCVEELALYLKPLSNNRGVG LSSTAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNHLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARLPGSSGLLSDDCLPLDMGVTRKPS PLTNGSAGHPMPQLIARGTDPVTYDLLRKPKMDGGSNSAPGLPPDSLDLGPKQGFPQPPH AMGHSRGPGDHMPKKIPGGVMPRGPQMYQQQLPDMYYSDSRQPPSASQYEPSQYPQGYPY QQPPQYSTQRYIRNPPPPGEPAGPAYQDPYPGYGPPERPYPAPHSAPXPFSYPPHYDTRG RHDPYPGPPPPPQPYSSQRDDMVRMSPAPLDVPPNHPYHQEQAARERYPPEGYYPTGAQP QSMRSYVREQYGRSSQPSLDYLHRRRKELMAQLEERKVISPPPFAASPTHTHTFPSDYPP EYGEESSKAFGKCREPDYGGQYSPWSCDTIGSYIVTKDAKPKEIMAPGAMEMMNVDCKGL RGEPSMEAQARRGAEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPVQAMASASTQ GPKPMAAEYSYGNHGGWGGASYPSHQTGSSSQGHFSERLSMPAQDREHLKIELQQVNQQI TQQTQIHGMEREVSALVAQPSQPGQNQGQQGKWPGPAGGSSSAALVSSEQLSMELHQVER EIGKRTRQMAMDSQVAHEVQYKMKAAENGQQDHKAQLEEIALALGEVSNGSSGLGQDGGV GGAMLSLTNKASSLSLCSEPGPGDSELQKNGVVHSCS NT seq 3354 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaagccccacaatggacggagttcctgctgtgtcccatctgcacgcagact ttcgaggagacggtacggcggcccatctcgctgggctgtggccacaccgtctgcaagatg tgcctgaacaagctccaccgcaaggcctgccccttcgaccagacagccatcgccaccgac atcgagcagctgcccgtcaacacagccctgctgcagcttgtggggggacaggttcccaag gttcagccggtggccctgatcaccagcccagaggattcgcagcactatgaggaggccagg cactgtgtggaggagctggctctttacctcaaacccctcagcaacaacagaggggtgggt ctaagcagcacggcccagagcatgctgagtcggcccatgcaaaggaaactggtgaccctg gtccactgtcagctggtggaggaggagggccgggtgcgggccatgagggcagctaggtct ctgggggagcgcacagtcacagagctcatcctgcagcaccagaatccccagcaattgtcg tccaatttgtgggccgccgtccgggccaggggctgccagttcttgggcccagccatgcaa gaggaggctctgaagctggtgctcttggctctggaggacggctcggccctgtccaggaag gttctggtgctgtttgtggtccagaggttagagccacgcttcccccaggcttccaagacc agcataggccacgtggtgcagctcctgtacagggcctcctgcttcaaggtgaccaagcgt gacgaggactcgtccctgatgcagctgaaagaggagttcaggacgtacgaggcactgcgg cgcgaacacgactcccagattgtccagatcgccatggagggtggcctccgcatcgcccct gaccagtggtcctccctgctctacggggaccagtctcacaagtcccacatgcagtccatc atcgacaagttgcagacgccggcgtcgtttgcccagagcgttcaggagctgaccatagcc ttgcagaggacaggcgaccccgccaaccttaaccacctccgaccacacctggaactactg gccaacatcgaccctagccccgacgccccccctcccacgtgggagcagctggagaagggt ctggtggcggtgaagactgtggtccacggcctggtggacttcatccagaaccacagcaag aagggagccgacccacaacagcccccccagcacagtaaatacaagacgtacatgtgtcgg gacatgaagcagaaggggggctgtccccgtggagccagctgtacctttgcccactctcag gaagagctggagaagtaccgtaagatgaacaagcgtttggcggctcgcctccctggctca tctggcctgctgtcggatgactgtctccctctggacatgggggtgacccggaaaccctcg cccctcaccaacggctcggccggacaccccatgccccagctcatcgcccgcggcaccgac cctgtgacctacgacctgttacgcaagcccaagatggacggcgggagcaacagcgccccg ggattgccccctgactctctggatttggggcccaaacaaggattccctcagcccccccat gccatgggccactccagggggccaggcgaccacatgcccaaaaagatacccggtggtgtg atgccccgggggcctcagatgtaccagcagcagctgcctgacatgtactactccgactca cgccaaccgccctctgcctcccagtacgagccttcgcagtaccctcaaggatatccctac cagcagcccccccagtactccactcagcgctacatccgaaacccccctccccccggcgag cccgctggaccagcctaccaggacccctatcccggctatggcccccccgagcgcccttac ccggctccccactccgcccccnnccccttctcctaccctccccactatgacacccggggc cgccacgacccttaccctggtcccccgcctccaccccagccatactcctcgcagagggac gacatggtccggatgagccccgcgcccctggatgtgccccctaaccacccctaccaccag gagcaggcggccagggagaggtaccccccagaggggtactacccaactggggcccagccc caatccatgaggtcctacgtcagggagcagtacggacgctcctcccagcccagcctggac tacctgcaccgccgccgcaaggagctgatggcccagctggaggagaggaaggtcatctcc cccccgccgttcgctgcctcccccacccacacccacaccttccctagtgactacccccca gagtatggggaggagagctccaaagcctttgggaagtgcagggagccggactacgggggc cagtattctccctggtcctgtgacaccatcggctcctacattgtcaccaaggacgccaag cccaaagaaatcatggcgcccggcgccatggagatgatgaatgtggattgtaaaggtctg cggggggagccttccatggaggcccaggccaggcggggggcagaggtgaaagacgacgac cccatcatccccttcggcccccagcccaccgtgtcgcgcttcggggccatctcacgcacc tccaagacaggctaccagacaacaggccccgtgcaggccatggcctctgcctctacccag ggacccaagcccatggccgcggagtactcctatgggaaccacggaggctggggcggcgcc tcctacccctcccaccagactggctcctcctctcagggacacttcagtgaaaggctgtct atgccagctcaggacagagagcatctgaagattgagctccaacaggtcaaccagcagatc acccaacagacccagatccacggcatggagagggaggtcagtgccctggtggcccagccc tcccagccaggtcagaaccagggccagcaggggaagtggcccggtccagcggggggttcc agcagcgctgccttggtgtccagcgaacagctcagcatggagctgcatcaggtggagagg gagatcggcaagaggacccgccagatggccatggacagccaggtggctcatgaggtccag tacaagatgaaggctgcagagaatggccagcaggaccacaaggcccagctagaggagatt gccctggccctcggtgaggtgtctaatggctccagcggtctaggtcaggacggcggtgtg ggcggagccatgttgtcactgaccaataaggcgtcttcgctcagcctgtgttctgagccg gggcccggggactcagagctgcagaagaacggtgtggtccattcctgctcctag

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