Coregonus clupeaformis (lake whitefish): 121580818
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Entry
121580818 CDS
T08357
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121580818
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121580818
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
121580818
NCBI-ProteinID:
XP_045080784
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All DBs
Position
14:46398808..46408404
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AA seq
547 aa
AA seq
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MDSIVSDVAVGMKRGSDDLNLYSTSPSSVTANENDSSKKLRVEDRMESPPSRVLHIRKLP
SEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVF
IQFSNHKELKTDSTLNQRAQAVLQAVSAVQDGGSPNSDTSMLDSVLAHAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAVDSAMAAALNKDSSLLGTPSGM
GAPYSNGGGFQSSLSLSQGGGAMSPMSAAAAAAAAAGRMALSGHSGCSGVLLVSNLNEEM
VTPQSLFTLFGVYGDAQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTL
SKHQAVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVPFGLDRE
DVTEEDLRLLFSNAGGIVKAFKFFQGHKMALLQMSTVEEAIQALMDLHNYDMGSNHHLKV
SFSKSTI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggacagcattgtcagtgatgttgcagttggcatgaagagaggctcagatgatttgaat
ctctacagcaccagcccaagctctgtgactgctaacgagaatgacagcagtaaaaaactg
agagtggaggacaggatggagagtcccccttcccgcgtgctccacatcaggaagttgccc
agcgaggtgtcagagactgaggtcatcgctcttggcctaccattcggcaaggtcaccaac
atcctcatgctgaaaggcaaaaatcaggctttcctggagctggggacagaggaggcggct
gttacaatggtgaactactacacggcggtgacgcctcaggtccgcaacgtcccagtgttc
atccagttctctaaccacaaggagctaaagacagacagcactctcaaccagcgcgcgcag
gctgtcctccaggccgtgtcggcggtgcaggacggtggctctcccaactctgacaccagt
atgctggacagtgttctagcccatgcccccagccccgtgctcaggataatcatcgacaac
atgttctaccccgtcactctggacgtcctccagcagatcttctccaagtttggaacggtc
atgaagatcatcactttcaccaagaacaaccagttccaggccctgctccagttcagcgaa
ccagtcaacgcccagcaagccagactgtccctggatggccagaacatctacaactcgtgc
tgcacgctgcggatcgacttctctaagctggtcaacctgaatgtcaagtacaacaacgac
aagagccgggactacacccggcccgagctccccgccggcgacggccagcctgcagtagac
tctgctatggctgccgccctcaacaaggactcctccctgctcggtaccccctctggaatg
ggagcgccctactctaatggtggagggtttcagtcttctctctccctctcgcagggcgga
ggagccatgagtccaatgagtgctgcggctgcagcggcagcggctgcagggaggatggcg
ctctccggacactccggctgcagcggtgtgctcctggtcagcaacctgaacgaagagatg
gttacgccccaaagtctgtttaccctcttcggggtgtatggtgatgctcagcgtgtgaag
atcctctacaataagaaggacagtgctcttatccagatgtcggacgggaaccaggcccag
cttgcgatgagccacctgaatggccagaagatgtacgggaagatcatccgtgtgactctt
tccaagcaccaggcagtgcagctgcccagggaagggctggatgaccagggcctaaccaag
gacttcaccaactcccccctgcaccgcttcaagaagcccggctccaagaactttcagaac
atcttccctccatccgccacgctccacctctccaacgtccctttcggactcgacagggag
gatgtgacggaggaggatttgcgactgctgttctctaacgctggtggcattgtgaaggcc
ttcaagtttttccaaggccacaaaatggcgctactccagatgtccacggtggaggaggcc
atccaggccttgatggacctccacaactacgacatgggcagcaaccaccacctgaaggtc
tccttctccaagtccaccatctag
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