Coregonus clupeaformis (lake whitefish): 121580856
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Entry
121580856 CDS
T08357
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121580856
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121580856
Surveillance factors
Other surveillance factors
121580856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
121580856
NCBI-ProteinID:
XP_045080767
LinkDB
All DBs
Position
14:44549844..44585401
Genome browser
AA seq
1385 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGHGGGSSSSVATSPPLSPAMPKYKLADYRYGREEMLALYV
KDREIPVDLHDKDFLPILQEEPLPPLALVAFTEEEQRNFSMSVNSAAVLRLMGRGGGPVG
PGVPRGRSTSRGRGRGRGDGGFYQRSFDDVEGGFGRGGREMHRSQSWEESHAESIFSPSR
GDRRFEKPSRKETEVAPTHFPMNHIRANYEEVGTGVGGLPVRKHDFTRSESENWRTSRDE
VNGEDGDEGGWRLAGASRWDSDRWCPPSPEGPRSAGWREAHPGEQPRQRRLPFDAREDER
GYRHPPSGSGSLEEDGGSLPEWCLEDAEEETGTFDSSGAFLSLKVRKAPKEPILEEAELD
FRPLEECDEGLEEDGQPRETKDTDGEARREPDRKQDVGRAVEEAPSPPEPQPPTTLLPPS
QPNRVEEPERPLERPFERTPAPEHRPEANKVPLPNTMLDSLPIPHTAAHTLTVSPVSAPS
PTIRMQQKPLEVPVVMPAPLPFSASLMAQSTSIMAPNIIATSTDLMAPIGRPTAMPPHRT
MDEDEGLKHFEQEAEKMVAYLQDGDDRLAAKSSAHKPAGLPLTHEAALKWFYKDPQGEIQ
GPFSNPEMTEWFQAGYFTMNLLVKRGCDEVFQPLGEIIKMWGRVPFAPGPAPPPLLGDAG
DQERLKRQQELTALNLYQLQQLQYQYLLRQQYAQALAQQKAQALSSAPHQQQQQQQQQIN
LLLQQYQALKMRSAENTTSESLLPPVTQSMSVPDSQGSVWEMQNTSQASCTSNIQQPTPS
AWEGSSVWDLPIDSMAQAPTIEQMQQLEKNKAAKVPHQLERERGEAELSAKREEEEKKRL
EEVLRARQEEEHKRLEEEELSRHKQEEALKRQRKQEEAQRQQKEEEEERQAQEEALRRLE
ERRREEEEERKQREEFLRKQEEARRKQEELETLRRREEEKRQEEAAAAAVALARQQQEEA
KRREQEAVRQQELARQRQQQQEALRRLQQQQQLAQMKLPSSSKWGQQSAVTAAAISQSQN
ALSLAEIQKVEEERELQAREEQRRQQAELLKLQQQQALQEARNPQAKLSGWGSMAKQPAT
TKSLLEIQREEAQQVKQRKEQGSGGQQPSHPTVTQQNRAQNRATTALSPSVWGSVATSGG
GGGAPNWGGDSSIWGDSTNSNMGFWDEEVKETAQPPPQAPPPARKPNAQKNNKGNANISS
RANKKVEEEEKLLKLFQGVNKRQQDGFMQWCEKTLHTLNTANNLDVPTFASFLKEVDSPY
EVHDYVRAYLGDTSEAKEFAKQFLERRAKQNANQQKPPQAPQNQQPTLKQQQQDSVWGVS
GTSSPSLYQSNHTSLQQQARFETVTSGKKKKKQKMVRADPSLLGFSVNAASERLNMGEIE
TVEDF
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactcagacactcaacttcggaccagaatggctccgggccctgtctgggggt
ggccatgggggtggtagcagcagtagcgttgccacctcaccacctctctcacctgcaatg
ccaaagtataaacttgcagactaccgctacgggagagaagaaatgctagcactttatgtc
aaggatagggagatccctgtagacctacatgataaggattttctgcccattttacaagag
gagcccctgccaccactggcacttgtagcttttacagaggaagagcagagaaatttttcc
atgtctgtaaacagtgccgctgtgctcaggctgatgggaagaggagggggtccggttggg
ccaggggtgccgaggggtcgaagtacctcacggggtcgaggtcggggtagaggagacgga
gggttttaccaaagaagttttgatgacgtggaaggaggctttggccgcgggggcagggag
atgcaccgctcccagagctgggaggagagtcatgctgagtctattttctccccgtctagg
ggagaccgaaggtttgaaaagccaagtcgaaaagagacagaagttgctcctacccacttc
ccgatgaatcatatccgtgctaactacgaggaggttgggaccggtgtggggggcttgcct
gtgaggaagcatgacttcacgcgttcggagagtgagaactggcgcacgtcccgggacgaa
gtgaatggtgaggatggtgacgaggggggctggcgcctagcgggtgcctcacgatgggac
agcgaccggtggtgccccccgagtccagaagggccgcggtcggcagggtggcgagaggct
cacccgggggagcagccgcggcagcgcaggctcccgttcgacgccagggaggatgagcgc
ggctacaggcatcccccatcgggcagcggcagcctggaggaggatggaggcagcctgcca
gagtggtgtctggaggacgctgaagaggagacgggcaccttcgactcctccggggccttc
ctttcgctcaaggttcgaaaagctcccaaggagcccatcctggaggaggcagagctggac
ttcagacccctggaggaatgtgacgagggtctggaggaggacggacagccccgggagacc
aaagacacagacggagaggccaggagagagcccgacagaaaacaggatgtgggtagagcg
gtggaggaggctccctctcctcctgagccccagccccccaccaccctgctgccccctagc
cagcccaacagagtggaggagcctgagaggccgttggagaggccatttgagcgaacccca
gccccggaacacaggccagaggccaacaaagtccccctgcccaacacaatgctggactcc
ctccccatcccccacaccgctgcacacactctcacagtgtctccagtgtcggccccgtcg
cccaccatccggatgcagcagaagcccctggaggtgcccgtggtcatgcccgccccgctg
cccttcagtgctagtctcatggcccagagcacgtctatcatggcccctaacattattgcc
accagcacggacctcatggcgcccatcggaaggcccacggccatgccgccacaccgcacc
atggatgaagatgagggactgaagcactttgaacaagaggcagagaagatggtggcttat
ctacaggacggtgatgaccggctggctgccaagagctcagcacacaaaccagccggcctg
ccgctcacacatgaggctgctctgaagtggttttataaagacccccagggagagatacag
ggtccgttcagtaacccggagatgacagagtggttccaggctggctacttcaccatgaac
ctgctggtgaagagaggctgtgacgaggtcttccagcccctgggtgagatcatcaagatg
tggggcagggtgccctttgcccccggcccagcaccgccacccctactgggtgacgccggg
gaccaggagcgtctgaagcggcagcaggagctgacggccctcaacctgtaccagctgcag
cagctgcagtaccagtacctgttgaggcagcagtacgcccaggccctggcccagcagaaa
gcccaggccctcagctcagcaccacaccagcagcagcagcaacagcagcagcagatcaac
ctgctcctccagcaataccaggccctcaagatgaggtcagcggaaaacacaacatctgag
agtctcttacctcctgtgactcagtccatgtccgtaccagactcccagggttctgtgtgg
gaaatgcagaacacctctcaagcctcctgcacatcaaacatccagcaacccacacccagt
gcgtgggagggcagcagcgtgtgggatctgcccatagactccatggcccaggcccccacc
atagaacagatgcaacagctggagaagaacaaggctgccaaggttcctcatcagctggag
cgtgagcggggtgaggcagagctgagtgccaagagggaggaggaggagaagaaaagactg
gaggaggtgttacgggccagacaggaggaggaacacaaacgcctggaggaggaggagcta
tcacgtcataaacaggaggaggcattgaagaggcagcggaagcaggaggaggcgcagcgc
caacagaaagaggaggaagaggagcggcaggcacaggaggaggccctccgcagactggag
gagaggaggagggaagaggaggaggagaggaagcaaagggaagagttcctccgcaaacag
gaggaggcgcgccgaaagcaggaggagctggagaccctgaggaggcgtgaggaggagaag
cggcaagaggaggcggcggcggccgcggtggcgttggcaaggcaacagcaggaggaggcg
aaaaggagggagcaggaggcggtgaggcagcaggagctagccagacagaggcagcagcag
caggaggcgctccgccgactacagcagcaacaacagctagcccagatgaagctgccgtct
tcctctaagtggggccagcagtcagcagtcacggcagcagccatctcccagtcccagaac
gccctgtcgcttgctgagatccagaaagtggaggaggagagggagctacaggcacgagag
gagcagcggcgccagcaggcggagctcctgaagctgcagcagcagcaggccctgcaggag
gcccggaatccccaagccaagctctctggctggggcagcatggccaagcagccagccacc
accaagtccctgctggagatccagagggaggaggcccagcaggtaaagcagaggaaggag
caggggagtgggggccagcagcccagtcaccccaccgtcacccagcagaaccgcgcccag
aacagagctaccaccgctctgagcccctcggtgtggggctcggtggccaccagtggcggt
ggtggcggggctcctaactggggcggggacagcagcatctggggtgacagcaccaactcc
aacatgggcttctgggacgaggaggtgaaggagacggcccagcccccgccacaggcccca
ccccccgccaggaagcccaacgctcagaagaacaacaaaggcaacgccaacatcagcagt
cgggccaataagaaggtggaggaagaggagaagctgctgaagttgttccagggggtcaat
aagagacagcaggatggcttcatgcagtggtgtgagaagaccctgcacaccctcaacacc
gccaacaacctggacgtcccgacatttgcgtccttcctgaaggaggtggacagtccgtac
gaggtgcacgactacgtgcgcgcctacctgggggacacgtccgaggccaaggagtttgcc
aagcagttccttgagcgccgtgccaagcagaatgccaaccaacagaaaccgccccaggcc
ccgcagaaccagcagccaacgttgaaacagcaacagcaggattcagtgtggggtgtgagc
gggacgagctctccgtctctgtaccagtcaaaccacaccagcctccagcagcaggcacgc
ttcgagaccgtcacctcagggaagaagaagaaaaagcagaagatggtccgggcagacccc
agcctgctaggtttttctgtgaatgcggcgtctgagaggttgaacatgggcgagattgag
acggtggaggacttttaa
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