Coregonus clupeaformis (lake whitefish): 121580864
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Entry
121580864 CDS
T08357
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
cclu04216
Ferroptosis
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121580864
00071 Fatty acid degradation
121580864
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121580864
09143 Cell growth and death
04216 Ferroptosis
121580864
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121580864
03320 PPAR signaling pathway
121580864
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121580864
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121580864
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121580864
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121580864
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121580864
Exosomal proteins of breast cancer cells
121580864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121580864
NCBI-ProteinID:
XP_045080763
LinkDB
All DBs
Position
14:complement(43162878..43182939)
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AA seq
715 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVYSVITFLPWYLFSGAGTNLDRARRVKARSVSGRPAGPYR
AINQADGSHQKLVWSLHPGVDTLDKVMVHGATRFPERDCLGTREVLSEEDELQPNGKVFK
KVILGEYQWMSYEETYQSAVCFGSGLAALGQRPQCNIAIFCETRAEWMIAAQACFIYNFP
LVTLYSTLGGAAIAHGLNETEITHIITSKDLLHSRLKAILLEVPRLQHIIVVDSKPTSWP
GFPRGIMVHNLDAVQELGSRPDNMAVARRQPLPSDIAVIMYTSGSTGIPKGVMISHSNII
AGITGMAERIPDLDETDTYIGYLPLAHVLELSAELVCISHGCCIGYSSPQTLADQSTKIK
KGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSSVQRTLFVLAYNYKMEQITKGYS
TPLCDSLVFKKVRSLLGGHMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGT
ISEMWDYSTGRVGAPLVCSEITLKDWEEGGYYSTDKPNPRGEIVIGGPNVTMGYYKNEVK
NREDFFMDSNGQRWFCTGDIGELHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKNCP
FVDNICAYANSDQSYVIGFVVPNQKQLTVLAEQRGLRGSWEEICNNPDMERDVLRIITEA
ALSAKLEGFEIPKKICLSAEPWTPETGLVTDAFKLKRKELKSHYQDDIERMYGGK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaagaggacatgaacccgctgcttctgcaagtcttccgctcggtggtctgg
gtctactctgtcattaccttcctgccatggtacctcttctcgggcgccggcaccaaccta
gaccgggcacggcgggtcaaggcgcggtcggtgagcgggcgcccggcgggcccttaccgg
gcgatcaaccaggcggacggtagccatcagaagctggtgtggtccttgcacccgggggtg
gacaccctggacaaggtgatggtgcacggggcgaccaggttcccagagcgggactgcctg
ggcaccagagaggtgctgagcgaggaggacgagctccaacctaacgggaaggtcttcaag
aaggttatcctaggggagtatcagtggatgtcgtacgaggagacctaccagtcagcagtg
tgttttggcagtggtctggccgcactgggccagaggcctcagtgtaacatcgccatcttc
tgtgagaccagggcggagtggatgatcgcagcacaggcctgcttcatatacaacttccca
ttggtgacgttgtactctactctgggcggagcggccatcgcccacggtctcaacgaaaca
gaaatcacccacatcatcaccagcaaagacctgctacacagccgtctcaaggccatcctg
ttagaggtgcctcggctgcagcacatcatcgtggtggacagtaagccaaccagctggcct
ggcttcccccgcggcatcatggtccacaacttggacgccgtgcaggagctgggctccaga
cccgacaacatggcggtggcacgccggcagcccctgccctctgacatcgctgtcatcatg
tacaccagcggctccaccggcatccccaagggcgtcatgatctcccatagcaacatcatc
gcgggcatcacgggcatggcagagcgcatcccagacctggatgagacagacacctacatt
gggtacctaccgctggctcatgttctggagctgagtgcagagttggtgtgtatctctcac
ggctgctgcatcggatactcctccccacagacgctagcagaccagtcgacaaagattaag
aagggcagtaaaggagacacaagtgttctgaagcctacactcatggctgctgtaccggaa
atcatggatcgtatctataagaatgtgatgaccaaggtggaggagatgagcagtgtacag
agaaccctgtttgtgttggcctacaactataagatggaacagatcaccaagggctacagc
accccgctctgtgacagtctggtgtttaagaaggtgcgctcattgttggggggtcacatg
agggtgctgctgtcgggcggagcgcccctttctgccgccacccagcgcttcatgaacatc
tgcctctgctgtcccgtgggccagggctacggcctcaccgagacctgcggagctggcacc
atcagcgagatgtgggactacagcacaggccgggtcggagctcctctggtctgctctgag
atcaccctcaaggactgggaagagggcggttactacagcacggacaagcccaacccgaga
ggtgagattgtgatcggcgggcccaacgtgaccatgggttactacaagaacgaggtgaag
aaccgtgaggacttcttcatggacagcaacggccagcgctggttctgtacgggagacatc
ggagagctccaccctgacggctgcctcaagatcatcgaccgtaagaaggacctggttaag
ctccaggctggggagtatgtgtctctggggaaggtggaggccatgctgaagaactgccct
ttcgtagacaacatctgtgcttacgcaaacagtgaccagtcatatgtgattggctttgtg
gtgcccaatcaaaagcagctgacagtgttggcagagcagagagggttacggggcagctgg
gaggagatctgtaacaaccctgacatggagagagacgtcctccgcatcatcacagaggcc
gccctgtcagccaaacttgagggctttgagatccctaagaagatctgtctgagtgcagag
ccctggaccccagagactggcctggtcacggacgcattcaaactcaaacgcaaggagctt
aaatcacattaccaagatgacatcgaaaggatgtacggtggcaagtaa
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