Coregonus clupeaformis (lake whitefish): 121580877
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Entry
121580877 CDS
T08357
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121580877
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121580877
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
121580877
NCBI-ProteinID:
XP_041751929
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Position
14:complement(41955011..41968988)
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AA seq
850 aa
AA seq
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MKFRDTGTTTSRDHGDTSSTSSVEVKENRDSRNQVDYSNILQPGYHPSSALCTDISKRKT
TVDCTMLPAHHPSALYTDISRGLSRTTALQRKQPLVEGKDRLLYELQLICKRTAHCLTSD
NAMTPSARSVGGRASCGSDATCQKTMMTSWSVTKKNALVQLNELRPGLQYEIVSQTGPVH
APVFAVGVEVNGLRFEGRGPTKKKAKMRAAELALRSFIQFPNAPQAHITMGNLNFINTTA
PTDFTSDQADLVPDTLFKEFEPEVQEDQILYHRTGGKELQFEEPPAQGQLHRTVEKGQEL
LSSICNHGRLVRLTLDLMSSANQKRQRIGSSIVRELRPVALLNELRPGLRYVCLTENVRG
RPIRSFVMAVRVDGRVFEGCGRSQRLAKAQAAASALQDLFNISLGPERSISNTASWAKSS
HLPQCFAEYIFHLVREKYSELADCCCTTSQSHRRHKVLAGIVMTRGFDLRRAQVVSLGTG
TKCISGEFVSDQGRAVNDCHAEVTTRRAFLRFLYAQLELFLCNRPDSLEQSIFVRDKESG
YRLRDGILFHMYVSSSPCGDARLNCPYEITATHHSGYRFVRKLRCHLRKKMEGGEGTLPV
SARRANQKWDRGLSREPPVTMSCTDKIARWNILGLQGSLLSHLVEPVYLHSLTVGSLCHT
GHLGRTMARRMGHIAPLPSSYRRNRLLLGCLSSSEGLQPGKSRNFSVNWSAGDEELEVVD
VSTGRRKDSGTPSRLCKRSLFTRWERLHHQSPSPQLSRPGGVLDAEAAHFLMSDSTTTLS
ARSVEGRVWPRSDATCQKTMEEAMKTYCGAKMAAGAYQRARQKFVVSLQEAGLGIWNRKP
PEQEHFQSRV
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttagagatactgggacaacaacatcaagagaccatggagacacttcaagtacc
agtagcgttgaggtgaaggagaaccgcgacagcagaaaccaagtggactattccaacata
ctacaacctggatatcatccatcatcagctctttgcactgacatctccaaaagaaagacg
acagtggactgtaccatgctacctgcacatcatccatcagctctttacactgacatctcc
agagggctctccaggactactgctctacagaggaagcagccattggtggaaggaaaagac
aggcttctctacgagctccagttgatctgtaagaggacggcccattgtcttacgtcagat
aacgcgatgactccgtctgcacggtcggttgggggacgagcatcgtgtgggagtgacgcc
acctgtcagaagacaatgatgacttcctggtctgtcacaaagaagaacgccctggtgcag
ttgaatgagctgagaccaggtctacagtatgagatagtgtctcagacagggccagttcac
gcccctgtgttcgctgtaggagtagaggtgaacggtctcaggttcgagggccgaggcccc
accaagaagaaggctaagatgagggcagcagagctggctcttaggtccttcatccagttc
cccaacgcccctcaggctcacatcaccatgggaaacctcaacttcatcaacaccacagca
ccaacagacttcacctcagatcaggccgatctcgtccccgacacgctcttcaaggagttt
gagccagaagtacaggaagaccaaatcctttatcacagaacagggggaaaggagttgcag
tttgaggagccaccagcccaaggacaactccacaggacagtggaaaagggacaggagttg
ctctccagtatctgtaaccatgggagactagtgcgcctgactcttgacctgatgtcctca
gccaatcagaagagacagaggatcggttcctctatcgtcagggaactgaggcccgtggct
ctgctcaatgagttaaggccaggcctgaggtacgtctgcctgacagagaacgtgagaggc
aggccgatcaggagctttgtgatggcagtacgggtggatggaagggtatttgagggctgt
gggcgcagtcagaggctggctaaagcccaggcagcagcctcagccctacaggacctgttt
aacatcagtctggggcctgagaggagcatcagcaatactgccagctgggccaagagctca
catctacctcagtgctttgcagagtatatcttccacttggtgagagagaaatacagtgag
ctggctgactgttgctgcactacctcccagtcgcacagacgtcacaaagtactggcaggc
atcgtaatgactagaggttttgatctgaggcgagcccaggtggtgtctctggggacaggg
accaagtgtatcagtggagagtttgtcagtgaccagggacgggcggttaatgactgccat
gctgaggtcaccaccaggagggctttcctccgcttcctctacgcccaactggagctcttc
ctctgcaaccggccagacagtttggagcagtcgatttttgtgcgagacaaagagtctggg
tacagactgagagatggtattctgttccatatgtatgtgagttcatctccctgcggggac
gcacgcctcaactgcccctacgagatcacagctacacaccacagcgggtatagatttgtg
aggaagttgcgctgccatctgaggaagaagatggaaggcggcgagggtacacttcctgtc
agcgcacggagagccaatcagaaatgggacagggggttgtcgagggaacctcccgtcacc
atgtcctgcacagataaaattgccaggtggaatattctaggtcttcagggctctctcctg
tctcacctggtggagccggtgtacctccacagcctcacagtgggcagcctgtgccacacg
ggtcacctgggaaggaccatggcacgacgcatggggcacatcgcccctctgccctcctcc
tatagacgcaacaggctgctcctcggctgcctcagcagcagtgagggtctgcagccaggg
aagtcccgcaacttcagtgtgaactggagtgctggagatgaggagctggaggtggtggat
gtctccacaggcaggaggaaagactcagggacaccatccagactctgcaagagatccctc
ttcactcgctgggagagactacaccaccagtctccctctcctcagctgagcaggccagga
ggcgtattggatgcagaggcggcccattttcttatgtcagatagcacaacgactctgtct
gcacggtcggttgagggacgagtgtggcctaggagtgacgccacctgtcagaagacaatg
gaggaggccatgaagacgtactgtggagctaagatggcagcaggggcctaccagagagcc
aggcagaagtttgttgtctcgctgcaggaggcaggtctgggcatctggaacaggaaacca
ccagaacaggagcacttccagagcagggtgtga
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