KEGG   Coregonus clupeaformis (lake whitefish): 121580899
Entry
121580899         CDS       T08357                                 
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121580899
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121580899
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN Laminin_B DNApol_Exo SlyX
Other DBs
NCBI-GeneID: 121580899
NCBI-ProteinID: XP_041751997
LinkDB
Position
14:40598975..40687627
AA seq 1595 aa
MRWFIQVLFSCTCLAVFSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVFLTDYNNQQDTTWWQSQTMLAGIQYPHSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKTNRGFIR
TGQDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNNGFVKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLPCNCNGKSAECYFDPELYRATGHGGHCRNCADNT
DGPNCERCLDNYYRDGSGTRCLPCSCNPVGSLATQCDNTGRCSCKPGVMGDKCDRCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFSCDRCKLGYFNMDPQNPQGCTP
CFCFQHSSVCDSAEGYSIDTVSSTFDRDDEQWTGQQRDGSSVSVQWSAGGEEISLISEDY
FPMYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNA
YPGENMQTFVFRLHDSTDYPWRPTLTHSEFQKLLHNLTSIKIRGTYSERSAGYLDDVKLI
TARRGPGSPARWVEKCTCPQGYVGQHCERCALGYRRSRPDLGPFSSCDACNCNGHSDKCN
PDTGMCDCGHNTAGLSCERCKDGYYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTN
CPTGTTGKRCELCDDGFFGDPLGENGQVRVCRACKCTDNIDPNAVGNCDRETGECLKCIY
NTDGFFCDRCREGFYGNPLATNPNDKCKPCSCSLYGTVDRQTSCPQVTGQCQCFPHVTNR
DCSTCEPGFFNLKSGTGCEGCNCNPTGSTNGQCDIGSGQCECQPGVTGQRCERCEVNFFG
FGSSGCKPCDCDPEGSSTAQCKEDGRCECRPGFVGARCDMCEENYFYNRSTPGCQQCPSC
YSLVRDKVNQQRQKLHDLQTLIDNLGSTSETVSDKAFEDRLKEAEKAIMDLLEEAQTSKD
VDKGLLERLGNLNNTLTTQWNRLQNIRNTVDNTGTQADKARNRVQDAENLIGRAREELDK
AKDAISKLDIKAPSITGDPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKALNL
LMKTLDGDGKTNQDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGDKALKIYANLTSM
PPFNTKSLEDEASKIKKEASDLDNLIDKTEKEYNDLRDDLKGKESEVRKLLEKGKTEQQT
ADQLLARADAAKALAEEAAKNGRTTYKEAQDILGNLRDFDKRVNDNKTAAEDAMKRIPEI
NATIIAANEKTKQAQGALGNAAADAKEAKGKAEEAEKIASAVQKGSAKTKADAEKAFEDT
MKLDGEVNGMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVL
NTINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDRKLAELNDVAKSQEEMITD
YDRQIREIRSDIANLNDIKNTLPGGCFNTPSLEQP
NT seq 4788 nt   +upstreamnt  +downstreamnt
atgcgttggtttattcaagttttgttttcatgtacttgtttggctgtcttcagccacagt
gctatggatgaatgcactgatgattcgagtcgtcctcagcgatgcatgccagagtttgtc
aacgcagctttcaatgtcactgtggtagctaccaatacttgtggctctcccccagaagaa
tactgcgtacaaaccggggttacgggggtcaccaagtcgtgccacatctgcgatgccagg
gatcgcagacaacaccacagtgctgtgtttctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcagactatgttagcgggcatccagtatccacactcaatcaatcta
actcttcatcttggcaaggctttcgacatcacttacgtgcgtctcaagttccacaccagc
cgcccagagagcttcgccatctacaagcgcacaagtgaggatggaccatggacgccctac
cagtactacagtggctcctgtgagaagacctaccagaagaccaacaggggcttcatccgc
accggacaggacgaacaacaggccctgtgcacagacgagttcagcgacatctcacccctg
acgggaggaaacgtggccttctcaacccttgaaggccggcccagtgcttacaactttgat
aacagcccagttcttcaggaatgggtgacagccacagatatcaaagtgaccctgaacagg
ctcaacacattcggagatgaagttttcaatgatcccaaggtcctgaaatcctactactat
gctatctcagactttgcagtgggaggaaggtgcaagtgcaacggccatgcgagtgagtgt
gtgaaaaacaacggtttcgtcaagccggtttgcaactgcaagcacaacacggagggcgat
gactgcaatgtgtgcaagccattctacaacgaccgtccctggaggagagctacagccaat
aaccctaacgagtgtctgccgtgcaactgtaatggcaagagtgcagagtgctactttgac
cctgagctgtaccgtgccactggccacggaggacactgccgcaactgtgccgacaacact
gacgggcccaactgtgagcgctgcctggacaactactacagagacggatctggcacccgc
tgcctgccctgcagctgcaacccagtaggctctctggccactcagtgtgacaacacggga
cgctgcagctgtaaaccaggtgtgatgggggacaagtgtgaccgctgccaacctggcttc
cacaccttgaccgaagcaggctgcagaccttgctcctgtaacccttccggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcagctgt
gacaggtgtaagctgggctacttcaacatggacccccagaaccctcagggttgcactcca
tgcttctgcttccagcactcctctgtctgtgacagcgctgaaggctacagcatcgacacc
gtctcctccaccttcgacagagatgatgagcagtggacaggccagcagcgtgacggctcc
agtgtttcagtccagtggtccgctggtggagaggagatctccctcatctccgaagactac
ttccccatgtactttgtggctccagagaggttcctgggcaatcagctgctgagctacggc
cagaacctcaccctgaacttccgggtggacaggagagacacgcgcctctcagctgaggat
gtggttctggagggggctggcctcagagtggctgtgcctctcattgctcagggaaatgct
tatcctggagagaacatgcagacatttgtattcaggctccacgacagcacagactacccc
tggaggcccaccctcactcactcagagttccagaagcttctgcacaatctgacgtccatc
aagatccgtggcacctatagcgagagaagtgctggttaccttgacgatgtgaagctgatc
acggcgaggagaggtcccgggagcccggctcgctgggtagagaagtgtacctgccctcag
ggctacgtgggacagcactgtgagaggtgcgccctgggatacaggaggagtagaccagac
ctagggcccttcagttcctgtgatgcttgcaactgtaatggacacagtgacaagtgcaac
cccgacacagggatgtgtgactgcggacacaacacagctgggctcagttgtgagaggtgt
aaagatggatactatggagactccactgtggggagttccagcgactgcaaaccctgcccc
tgccccggaggatccacttgtgctgttgtgcccaagaccaaggaggttgtctgcaccaac
tgtcctactggaaccacaggcaagcgctgcgagctgtgtgatgatggtttcttcggagac
cccctgggggagaatgggcaggtaagggtgtgtcgggcctgtaagtgtaccgacaacatc
gaccccaacgctgtgggcaactgtgacagagagaccggggagtgcctcaagtgtatctac
aacacagatggcttcttctgcgaccgctgcagagagggcttctatggaaaccctctggcc
accaaccccaacgacaagtgcaaaccctgctcctgctctctgtatggcacagtggacaga
cagaccagctgtccacaggtcacaggccagtgccagtgtttcccccacgtcaccaacagg
gactgcagcacctgtgagcctggcttcttcaacctgaagagcggaacaggctgtgaagga
tgcaactgcaatcctactgggtccaccaacggtcagtgtgacatcggttccggtcagtgt
gaatgccagcccggtgtcaccggtcagcgctgtgaacgctgcgaggtcaacttctttgga
ttcggatcgtcaggctgcaaaccgtgcgactgcgacccagagggctcctcgacggcccag
tgtaaagaagatggccgctgtgagtgccgtccaggcttcgtgggagccaggtgtgacatg
tgtgaggagaattacttctacaaccgctctactcctggctgccagcagtgtccgtcctgt
tattccctcgtcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagact
ttgattgacaacctgggctccacgtcagagactgtgagtgacaaggcgtttgaggaccga
ctgaaggaggcagagaaagccatcatggacctactggaggaggctcagaccagcaaagat
gtggacaaaggcctgctggagcgcctggggaacctgaacaacacactgaccactcagtgg
aatcgtctgcagaacatcaggaacaccgtggacaacaccggaacccaggccgacaaggcc
cgcaaccgggtccaagacgccgagaacctgatcggccgcgcccgcgaggaactggacaag
gccaaggatgccatcagcaaactggacatcaaagcaccctcaatcactggagatcctaac
aacatgacccttctggcagaggaggctcgcaatctggccgacaaacataaaatggacgcg
gatcaaattgagaagatcgccaaggatgccaacgacacgtccaccaaggctctcaacctg
ctgatgaagactctagatggcgatggcaagaccaaccaagacattgatgagctcaacagg
aagtacaatgaggcaaaggacctggccaagaacctggagaaacaggccaacaaggtgcat
gctgaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgacaagcatg
ccacctttcaacaccaaatcactggaggacgaagcgagcaagatcaagaaggaagcgtct
gacctggacaatctgattgacaagacagagaaggagtacaacgacttgagggacgacctg
aaagggaaggagtctgaggtccgcaagctgctggagaagggaaagactgagcagcagact
gccgatcagttgctggctcgtgccgatgctgccaaggcgctggctgaggaggctgccaag
aatgggaggaccacctacaaggaggcccaagacattctgggaaatctgagagactttgac
aagcgggtgaatgacaacaagacggcagctgaggacgccatgaagagaatcccagagatc
aacgctaccatcatcgcggccaatgagaagaccaagcaggctcagggggcgctaggcaac
gcagctgcagacgccaaggaggccaagggcaaggcggaggaggcagaaaagatagccagc
gctgtgcagaagggttctgctaaaaccaaggcggatgcagagaaggcatttgaggacaca
atgaagctggatggggaggtgaacggcatgatggaccagctgagtgcagccgaggcagag
ctggccaagaagaaagctgaggccgaccaggacatgatgatggctagcatggcatcagac
aatgcgaaggaagcggaggacaacgcccgcaaagccaagagcgctgtcaggaccgttctc
aataccatcaacgacctactgaagtcactgggcaacattgacaaggtggacctgagcaag
ttgggcttgattgaggggtcgctgaagcaggccaaggacaagatggcgaacagcgacctg
gaccgcaagctggcggagctgaatgacgtggctaagagccaggaggagatgatcaccgac
tacgacaggcagatcagggagatccggtccgacatcgccaacctcaacgacatcaagaac
acgttacctggcggctgcttcaacaccccatccctagagcaaccttaa

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