Coregonus clupeaformis (lake whitefish): 121580899
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Entry
121580899 CDS
T08357
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121580899
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121580899
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GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
DNApol_Exo
SlyX
Motif
Other DBs
NCBI-GeneID:
121580899
NCBI-ProteinID:
XP_041751997
LinkDB
All DBs
Position
14:40598975..40687627
Genome browser
AA seq
1595 aa
AA seq
DB search
MRWFIQVLFSCTCLAVFSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVFLTDYNNQQDTTWWQSQTMLAGIQYPHSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKTNRGFIR
TGQDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNNGFVKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLPCNCNGKSAECYFDPELYRATGHGGHCRNCADNT
DGPNCERCLDNYYRDGSGTRCLPCSCNPVGSLATQCDNTGRCSCKPGVMGDKCDRCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFSCDRCKLGYFNMDPQNPQGCTP
CFCFQHSSVCDSAEGYSIDTVSSTFDRDDEQWTGQQRDGSSVSVQWSAGGEEISLISEDY
FPMYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNA
YPGENMQTFVFRLHDSTDYPWRPTLTHSEFQKLLHNLTSIKIRGTYSERSAGYLDDVKLI
TARRGPGSPARWVEKCTCPQGYVGQHCERCALGYRRSRPDLGPFSSCDACNCNGHSDKCN
PDTGMCDCGHNTAGLSCERCKDGYYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTN
CPTGTTGKRCELCDDGFFGDPLGENGQVRVCRACKCTDNIDPNAVGNCDRETGECLKCIY
NTDGFFCDRCREGFYGNPLATNPNDKCKPCSCSLYGTVDRQTSCPQVTGQCQCFPHVTNR
DCSTCEPGFFNLKSGTGCEGCNCNPTGSTNGQCDIGSGQCECQPGVTGQRCERCEVNFFG
FGSSGCKPCDCDPEGSSTAQCKEDGRCECRPGFVGARCDMCEENYFYNRSTPGCQQCPSC
YSLVRDKVNQQRQKLHDLQTLIDNLGSTSETVSDKAFEDRLKEAEKAIMDLLEEAQTSKD
VDKGLLERLGNLNNTLTTQWNRLQNIRNTVDNTGTQADKARNRVQDAENLIGRAREELDK
AKDAISKLDIKAPSITGDPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKALNL
LMKTLDGDGKTNQDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGDKALKIYANLTSM
PPFNTKSLEDEASKIKKEASDLDNLIDKTEKEYNDLRDDLKGKESEVRKLLEKGKTEQQT
ADQLLARADAAKALAEEAAKNGRTTYKEAQDILGNLRDFDKRVNDNKTAAEDAMKRIPEI
NATIIAANEKTKQAQGALGNAAADAKEAKGKAEEAEKIASAVQKGSAKTKADAEKAFEDT
MKLDGEVNGMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVL
NTINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDRKLAELNDVAKSQEEMITD
YDRQIREIRSDIANLNDIKNTLPGGCFNTPSLEQP
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggtttattcaagttttgttttcatgtacttgtttggctgtcttcagccacagt
gctatggatgaatgcactgatgattcgagtcgtcctcagcgatgcatgccagagtttgtc
aacgcagctttcaatgtcactgtggtagctaccaatacttgtggctctcccccagaagaa
tactgcgtacaaaccggggttacgggggtcaccaagtcgtgccacatctgcgatgccagg
gatcgcagacaacaccacagtgctgtgtttctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcagactatgttagcgggcatccagtatccacactcaatcaatcta
actcttcatcttggcaaggctttcgacatcacttacgtgcgtctcaagttccacaccagc
cgcccagagagcttcgccatctacaagcgcacaagtgaggatggaccatggacgccctac
cagtactacagtggctcctgtgagaagacctaccagaagaccaacaggggcttcatccgc
accggacaggacgaacaacaggccctgtgcacagacgagttcagcgacatctcacccctg
acgggaggaaacgtggccttctcaacccttgaaggccggcccagtgcttacaactttgat
aacagcccagttcttcaggaatgggtgacagccacagatatcaaagtgaccctgaacagg
ctcaacacattcggagatgaagttttcaatgatcccaaggtcctgaaatcctactactat
gctatctcagactttgcagtgggaggaaggtgcaagtgcaacggccatgcgagtgagtgt
gtgaaaaacaacggtttcgtcaagccggtttgcaactgcaagcacaacacggagggcgat
gactgcaatgtgtgcaagccattctacaacgaccgtccctggaggagagctacagccaat
aaccctaacgagtgtctgccgtgcaactgtaatggcaagagtgcagagtgctactttgac
cctgagctgtaccgtgccactggccacggaggacactgccgcaactgtgccgacaacact
gacgggcccaactgtgagcgctgcctggacaactactacagagacggatctggcacccgc
tgcctgccctgcagctgcaacccagtaggctctctggccactcagtgtgacaacacggga
cgctgcagctgtaaaccaggtgtgatgggggacaagtgtgaccgctgccaacctggcttc
cacaccttgaccgaagcaggctgcagaccttgctcctgtaacccttccggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcagctgt
gacaggtgtaagctgggctacttcaacatggacccccagaaccctcagggttgcactcca
tgcttctgcttccagcactcctctgtctgtgacagcgctgaaggctacagcatcgacacc
gtctcctccaccttcgacagagatgatgagcagtggacaggccagcagcgtgacggctcc
agtgtttcagtccagtggtccgctggtggagaggagatctccctcatctccgaagactac
ttccccatgtactttgtggctccagagaggttcctgggcaatcagctgctgagctacggc
cagaacctcaccctgaacttccgggtggacaggagagacacgcgcctctcagctgaggat
gtggttctggagggggctggcctcagagtggctgtgcctctcattgctcagggaaatgct
tatcctggagagaacatgcagacatttgtattcaggctccacgacagcacagactacccc
tggaggcccaccctcactcactcagagttccagaagcttctgcacaatctgacgtccatc
aagatccgtggcacctatagcgagagaagtgctggttaccttgacgatgtgaagctgatc
acggcgaggagaggtcccgggagcccggctcgctgggtagagaagtgtacctgccctcag
ggctacgtgggacagcactgtgagaggtgcgccctgggatacaggaggagtagaccagac
ctagggcccttcagttcctgtgatgcttgcaactgtaatggacacagtgacaagtgcaac
cccgacacagggatgtgtgactgcggacacaacacagctgggctcagttgtgagaggtgt
aaagatggatactatggagactccactgtggggagttccagcgactgcaaaccctgcccc
tgccccggaggatccacttgtgctgttgtgcccaagaccaaggaggttgtctgcaccaac
tgtcctactggaaccacaggcaagcgctgcgagctgtgtgatgatggtttcttcggagac
cccctgggggagaatgggcaggtaagggtgtgtcgggcctgtaagtgtaccgacaacatc
gaccccaacgctgtgggcaactgtgacagagagaccggggagtgcctcaagtgtatctac
aacacagatggcttcttctgcgaccgctgcagagagggcttctatggaaaccctctggcc
accaaccccaacgacaagtgcaaaccctgctcctgctctctgtatggcacagtggacaga
cagaccagctgtccacaggtcacaggccagtgccagtgtttcccccacgtcaccaacagg
gactgcagcacctgtgagcctggcttcttcaacctgaagagcggaacaggctgtgaagga
tgcaactgcaatcctactgggtccaccaacggtcagtgtgacatcggttccggtcagtgt
gaatgccagcccggtgtcaccggtcagcgctgtgaacgctgcgaggtcaacttctttgga
ttcggatcgtcaggctgcaaaccgtgcgactgcgacccagagggctcctcgacggcccag
tgtaaagaagatggccgctgtgagtgccgtccaggcttcgtgggagccaggtgtgacatg
tgtgaggagaattacttctacaaccgctctactcctggctgccagcagtgtccgtcctgt
tattccctcgtcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagact
ttgattgacaacctgggctccacgtcagagactgtgagtgacaaggcgtttgaggaccga
ctgaaggaggcagagaaagccatcatggacctactggaggaggctcagaccagcaaagat
gtggacaaaggcctgctggagcgcctggggaacctgaacaacacactgaccactcagtgg
aatcgtctgcagaacatcaggaacaccgtggacaacaccggaacccaggccgacaaggcc
cgcaaccgggtccaagacgccgagaacctgatcggccgcgcccgcgaggaactggacaag
gccaaggatgccatcagcaaactggacatcaaagcaccctcaatcactggagatcctaac
aacatgacccttctggcagaggaggctcgcaatctggccgacaaacataaaatggacgcg
gatcaaattgagaagatcgccaaggatgccaacgacacgtccaccaaggctctcaacctg
ctgatgaagactctagatggcgatggcaagaccaaccaagacattgatgagctcaacagg
aagtacaatgaggcaaaggacctggccaagaacctggagaaacaggccaacaaggtgcat
gctgaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgacaagcatg
ccacctttcaacaccaaatcactggaggacgaagcgagcaagatcaagaaggaagcgtct
gacctggacaatctgattgacaagacagagaaggagtacaacgacttgagggacgacctg
aaagggaaggagtctgaggtccgcaagctgctggagaagggaaagactgagcagcagact
gccgatcagttgctggctcgtgccgatgctgccaaggcgctggctgaggaggctgccaag
aatgggaggaccacctacaaggaggcccaagacattctgggaaatctgagagactttgac
aagcgggtgaatgacaacaagacggcagctgaggacgccatgaagagaatcccagagatc
aacgctaccatcatcgcggccaatgagaagaccaagcaggctcagggggcgctaggcaac
gcagctgcagacgccaaggaggccaagggcaaggcggaggaggcagaaaagatagccagc
gctgtgcagaagggttctgctaaaaccaaggcggatgcagagaaggcatttgaggacaca
atgaagctggatggggaggtgaacggcatgatggaccagctgagtgcagccgaggcagag
ctggccaagaagaaagctgaggccgaccaggacatgatgatggctagcatggcatcagac
aatgcgaaggaagcggaggacaacgcccgcaaagccaagagcgctgtcaggaccgttctc
aataccatcaacgacctactgaagtcactgggcaacattgacaaggtggacctgagcaag
ttgggcttgattgaggggtcgctgaagcaggccaaggacaagatggcgaacagcgacctg
gaccgcaagctggcggagctgaatgacgtggctaagagccaggaggagatgatcaccgac
tacgacaggcagatcagggagatccggtccgacatcgccaacctcaacgacatcaagaac
acgttacctggcggctgcttcaacaccccatccctagagcaaccttaa
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integrated database retrieval system