Coregonus clupeaformis (lake whitefish): 121580918 Help Entry 121580918         CDS       T08357                                  Name (RefSeq) protein patched homolog 1   KO K11101   patched 2 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     121580918 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sterol-sensing TRA2_N Patched Motif Other DBs NCBI-GeneID:  121580918 NCBI-ProteinID:  XP_041752047 LinkDB All DBs Position 14:complement(39146579..39177231) Genome browser AA seq 1436 aa AA seqDB search MASDPRVPGAGVFGDLPPSYMRSPPPVNSDVLRRPSYCHAAFALKQISKGKAVGQKAPLW VRARFQALLFSLGCHIQRHCGKVLFIGLLVFGALSVGLRVAAIETDIEQLWVEAGSRVSR ELHYTKEKQGEESVFTSQMLIQTPKQEGTNILTQDALLLHLEAALSASKVQVSLFGKSWD LNKICYKSGVPIIENVMIERMIDKLFPCMIVTPLDCFWEGAKLQGGSAYLPGMPDIQWMN LDPLKLMEELSQFTSLEGFREMLDKAQVGHAYMNRPCLDPNDLECPISAPNKDLRESPDI AGRLQGGCHGFSKKFMHWQEELILGGRVKDTQNALQSAEALQTMFLLMSPKQLYEHFKDD YEIHDINWNEDKATAILESWQRKFVEVAHGSIPQNSTSEIHAFSTTTLNDIMKSFSDVSV IRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNAAT TQVLPFLALGIGVDDMFLLAHSFTETGINIPFKERTGDCLRRTGTSVALTSINNMIAFFM AALVPIPALRAFSLQAAIIVVFNFAMVLLIFPAILSLDLHRREDKRLDILCCFYSPCSSR VIQIQPQEFSDSNDNTTTTHSHAPGAQTTTTYTGSTITTSTQITTTVQAFTQCDAAGQHI VTILPPTSQISTSPPSVVVASSPAPPSPTDSYGSQLFSPSSSTRDLLAQMDESKEARECV PLPFFRWNLSSFARDKYAPLLLKPESKVVVVVLFVALLGLSLYGTTMVHDGLYLTDIVPR DTKEYDFIKAQFKYFSFYNMYLVTMDGFDYARSQRLLIQLHNSFTSVKYVVRDSDQQLPR MWLHYFQDWLRGLQAAFDADWEAGRITWDNYRNGTEDGVLAYKLLIQTGSKKDPFNYNQL TSRRLMNEEGLIHPEVFYIYLTVWVSNDPLGYAASQGNFYPHPREWIHDKYDTTGENLRI PAAEPLEFAQFPFYLNGLRQASDFIEGIESVRAICEEFTRKGVLNYPNGYPFLFWEQYIG LRHWFLLAVSVVLACTFLVCAILLLNPWTAGIIVFILAMMTVELFGIMGLIGIKLSAIPV VILIASVGIGVEFTVHIALAFLTAIGNRNRRSAVALEHMFAPVIDGAISTLLGVLMLAGS EFDFILRYFFAVLAILTVLGILNGLVLLPVLLSLMGPPPEVTPADNGSRLPTPSPEPLPP PMTHHGYYAGHGPQGPRQQAFSESSDSEYYSETTTTSGIGEEEYKYCDRSPYITPPTSHI LLEDSKNPSFPKLTVVKPFKEGPTVTVQKELLNESSPNAVTSVSSQLTQWDNKHDYNSDQ GPRRQHLPSDRTQGPGRTNHCGPRSQTNRGPHQNRTKMPAYNGGIVASSAVTTMVTATAS VTVAVHPSLPGAYHGYMHEGYEDSESDCFEDTKRTSQSCGKATQSSKSESLELEDL NT seq 4311 nt NT seq  +upstreamnt  +downstreamnt atggcctcggatcccagagtcccaggggccggtgtttttggagatttacccccaagttat atgcgttctccgccgccagtaaactcagatgttctccggagacccagttactgccacgct gctttcgcattaaaacagatttctaaggggaaggctgtgggtcagaaagccccgttgtgg gttcgggcgcggttccaggctcttctattttctttgggctgtcacatccagcgacattgt ggaaaagtccttttcattggactgcttgtgttcggtgccttgtctgtgggtttgcgggtc gctgccattgagacggacattgagcaactatgggtggaagccggtagccgagtgagtcgg gagctgcactacaccaaggagaagcagggagaggagtctgtgttcacgtcgcagatgctc atacaaacccccaaacaggaagggaccaacattctgacccaggatgctttgctgcttcac ctggaggcagcactctcagccagcaaggtccaggtgtctctgtttggaaaatcatgggat ctcaataaaatctgctacaaatctggtgtccctatcatagaaaatgtcatgattgaaagg atgattgacaagctgttcccctgtatgattgttaccccactggactgtttctgggaaggt gcaaagctccagggggggtcagcatacttaccggggatgcctgacatccagtggatgaac ctggaccctctgaagctgatggaggagctcagccagttcaccagtctggagggcttcagg gagatgttggacaaggcccaggtgggccacgcttacatgaaccgcccctgcctggacccc aacgacctcgagtgccccatcagcgcccccaacaaggacctgagagagagtcctgacatc gctgggcggctccaaggcggttgccacggcttctccaaaaagttcatgcactggcaggag gagctgatcctgggcggccgggtcaaggacacccagaatgctttgcagagtgcggaggcc ctccagaccatgtttctcctgatgagccccaagcagctctacgagcactttaaggatgac tatgagatccatgacatcaactggaatgaggacaaggccaccgccatcctggagtcctgg cagaggaagtttgtggaggtggctcatggaagtatcccccagaactccacttcagagatc cacgccttctccaccaccaccctcaacgacatcatgaagtccttctctgatgtcagtgtc atccgggtggctggaggctacctgctcatgctggcctacgcctgtgtgaccatgctccgt tgggactgtgccaagtcccagggggccgtggggctggctggcgtgctcctggtggctctg tctgtggcagctggcctggggctgtgctctctgctgggcctgtcctttaacgctgccacc acacaggttctccccttcctggctctggggattggtgtggatgacatgttccttctggcc cactccttcactgagactggcatcaacatcccctttaaggagaggacgggggactgcctg aggaggactggcaccagcgtggcgctcacctccatcaacaacatgattgcctttttcatg gcagccctggtccccatcccagcactgcgtgccttctctctgcaggcggccattattgtg gtgttcaacttcgcgatggtgctcctcatcttcccggccatcctgagtttggacctgcac cgtcgggaggacaagcgtctagacatcctgtgttgtttctacagcccctgctcctcccgg gtcatccagatccaaccccaggagttctccgattccaacgacaacaccaccaccacccac agccacgcgcctggcgcccagactacaacgacctacacaggctccaccatcaccaccagc acccagatcaccaccaccgtccaggccttcacccagtgtgacgcggcgggccagcacata gtcaccatcctgccccccacctcccagatctccaccagccctccctctgtggtggtggcc tcctctcccgctcccccctcccccaccgactcctatggctcccagctcttcagcccctct agctccacccgggacctcctggcacagatggacgagtccaaggaggccagggagtgtgtt ccgctccccttcttccgctggaacctgtcaagctttgcccgggacaagtacgctcctctc ctcctaaagccagagagcaaggtggtggtcgtggtcctcttcgtggctctgctggggctc agcctgtacggaactaccatggtccacgacggactctacctgaccgacattgtgccccgc gacaccaaggagtacgacttcatcaaggcccagttcaagtacttctccttctacaacatg taccttgtgaccatggacggctttgactatgcccgctcccagcgtctcctcatccagctg cacaactccttcacctcggtcaagtacgtggtgagggacagcgaccagcagctgccccgg atgtggctgcactatttccaggactggctaagaggactgcaggctgccttcgatgcagac tgggaggcaggcaggatcacctgggataactaccgtaacggcaccgaggatggtgttctg gcctacaagctgctcatccagaccggctccaagaaggacccctttaactacaaccagctg acttctcgtcgtctgatgaatgaggagggtctgattcacccagaggtcttctatatctac ctgactgtgtgggtgagcaatgaccctctgggctatgctgcctctcagggtaacttctac cctcaccctcgcgagtggatccacgacaagtatgacaccaccggagagaatctgcgcatc cctgctgcggagcccctggagtttgctcagttccctttctacctgaacggcctgaggcag gcgtccgacttcatcgagggtattgagagcgtgcgcgccatttgcgaggagttcacccgt aaaggtgtgctcaactaccccaacggttaccccttcctgttctgggagcagtacatcggc ttgcgacactggttcctcctggcggtcagcgtggtgctagcctgcaccttcctggtctgt gccatcctcctgctcaacccctggaccgctggcatcattgtcttcatcctggccatgatg acggtggagctgttcggtatcatgggcctgatcggcatcaagctcagtgccatcccagtg gttatcctcatcgcctctgtgggcatcggcgtcgagttcactgtccatatcgcactggcc tttctgacggccatagggaataggaacaggcgttctgcagtggccctggagcacatgttt gcccctgtgattgacggggccatctctactctgctaggggtcctcatgctggctggctcc gagtttgacttcatcctgaggtacttctttgcggttctggctatcctgaccgtgctgggg atcctgaatggactggtgctgctgcccgtgctgctctccctcatgggcccacccccggag gtcaccccggccgacaacggcagccgcctgcccaccccgtcgccggagcccctcccccct cccatgacccaccacggctactacgcaggacacggtccacagggcccacgacaacaggcc ttctcagagtcatcggactctgaatactactctgaaacgactaccacgtcagggataggg gaggaggagtacaagtactgtgaccgcagtccttacatcacccctcctacctctcatata ctactggaggacagcaagaaccccagcttccccaaactcacggtggtgaaaccattcaaa gagggcccgaccgtaaccgttcagaaagaactcttaaatgagtcttctccgaatgcggtg acctcggtcagctctcaactcacacagtgggataacaaacatgattacaattctgaccag ggacccaggaggcaacatttacccagtgacaggacccaaggtcctgggaggactaatcac tgtggtcccaggtctcaaaccaacagagggcctcatcaaaacaggactaagatgccggcc tataatggtggtatcgtggccagtagtgctgttactaccatggttacggccacagcctca gtgactgtggctgtgcaccccagcttgccgggggcctaccatgggtacatgcacgagggc tacgaggacagtgaatcagactgctttgaggacactaagaggacttcacaatcttgtggg aaagctacccaatcttccaagagtgaatccttggagcttgaagacctgtaa

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