Coregonus clupeaformis (lake whitefish): 121580929
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Entry
121580929 CDS
T08357
Name
(RefSeq) target of EGR1 protein 1-like
KO
K13202
target of EGR1 protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121580929
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121580929
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Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
NST1
Motif
Other DBs
NCBI-GeneID:
121580929
NCBI-ProteinID:
XP_041752068
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Position
14:38203968..38209591
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AA seq
513 aa
AA seq
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MTSSIVVPVIDVQNDNFKELWPAMVLAIKTASFIALDTELSGLGNRKALLAECIEDRYKA
ICNAARTRSILSLGFACYKKLENKDDDTYLVQVYNLTLLCSEKYIIEPQSVQFLVQHGFD
FNKQYAEGVPYLRGNYRGVDAHGINMRMLFVELLRARKPLVLHNGLIDMVFLYQCFYAQL
PDKLGTFTADLSQMFPAGIYDTKYATEYELRFAASYLEYAYKKCKLDNSKSIEAGGSGRH
LFLEFCKYTGHLSKYVDYRPCLAGSSPDGPLNVCQRFSDYDWCPNGSQCPLSHDTDLIIQ
HDEKNKKKKRKRKRNSSSQGKAEVDGAPESKQPHMELEQVIPDRDTKPLPVTELADGAQA
QGSESDEKMNTKVEEGNGVREPQAASADGELKTDKEEVEGNGVSEPQPLATPAAEKKEES
MRKKLEGGTHRTGFDAFMTGYIFSYAATLTEKVGEPLSSESWLPECLNKVYLSGKSVPMH
IVKSTFSKSFKAHMRMMAVVWGKSVVSKVEGTV
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctccatcgtagtccctgttattgatgtgcagaatgataatttcaaagaactg
tggcctgctatggtccttgcaatcaagactgcctccttcattgcactggatacggaattg
agtggccttggaaatagaaaagctttactggcagaatgcatagaggaccgttacaaagcg
atatgcaatgcagctcgcacacgctccattctctcccttgggtttgcttgttataagaaa
cttgaaaacaaggatgatgatacgtaccttgtgcaggtgtacaacctgacattgctctgc
agtgagaagtacataattgaaccacagtccgtgcagttcctggtgcaacatggatttgac
ttcaacaaacaatatgctgaaggtgttccttatctcaggggaaattacaggggagtggat
gcccatggaataaacatgaggatgctgtttgtggaactcctacgggctcgcaagcctttg
gtgctgcacaacggcttgattgacatggtgttcctttatcagtgcttctatgcccaactg
ccagataaactaggcactttcactgctgacttgtcccagatgttccctgctgggatctat
gacaccaagtacgctacagagtatgagctgcgctttgctgcctcttacctggagtatgcc
tacaagaaatgcaaattggacaacagcaagtcgattgaggctggtggtagtggacgccat
ctgttcctggagttctgcaaatacacaggccacctgagcaaatatgtggactacaggccc
tgtctggctgggtctagcccggatggaccgctcaatgtctgccagcgcttctctgattat
gattggtgccccaatgggtcacagtgtcccttgtcacatgacaccgacctcatcatccag
catgatgaaaaaaacaagaaaaagaaacggaagaggaaaagaaatagctcttctcagggg
aaagctgaggttgatggtgcccccgagagcaagcagccccatatggagctggagcaggtg
atccctgacagagacaccaaacctctccctgtcacagagctggcagatggggctcaggca
caggggtcagagagcgacgagaaaatgaacactaaggtggaggaaggcaacggagtcaga
gagccacaggctgcgtctgcagatggggaattgaagactgacaaagaagaggtggaagga
aatggagtgtcagagccacagcctctcgccacaccagctgcagagaagaaagaagagtcc
atgaggaagaagctggagggtggtacacaccggacagggtttgatgcattcatgacaggc
tacattttctcctatgccgccactttgacagagaaagtaggtgagccactgagctcagag
tcctggctccctgagtgcctgaacaaggtttacctcagtggcaagtctgtcccgatgcat
atcgtcaagagcacattctccaagtccttcaaggctcacatgcgcatgatggctgtcgtg
tggggaaagagcgtggttagcaaagtagagggaactgtgtaa
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