Coregonus clupeaformis (lake whitefish): 121580940
Help
Entry
121580940 CDS
T08357
Name
(RefSeq) cadherin-12-like isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121580940
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121580940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Stevor
Motif
Other DBs
NCBI-GeneID:
121580940
NCBI-ProteinID:
XP_041752089
LinkDB
All DBs
Position
14:complement(37361077..37413858)
Genome browser
AA seq
804 aa
AA seq
DB search
MIPRNGLLLVFWFLLDKGFLAPLHSPPQSRMGREHHLGGVAGLGLRRHGASGVQRVKRGW
VWNQFFVLEEYMGSEPQYVGKLHTDLDRGDSEVKYTLSGEGAGTIFTIDQTTGDIHALMG
LDREEKSYYTLRAQAMDMHTGRPLEPESEFIIKVQDINDNEPKFLEGPYTASVPEMSPGG
TFVMQVTATDADDPTYGNSARIVYSILYGQPYFSVDSKTGVIRTALPNMDREMKELYQVL
IQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSIFHLRVPESSSVGSAVGKIRAHDL
DSGRNAEVEYSIVPGDEGKVFDVTSNMHSQEGIIVLRKHLDYENKKSYTFKVEASNAHRD
PRFLHLGPFKDIATVKVNVLDVDEPPVFTKTSYTIDVYEDTPVGTIIGSVTAQDLDASSS
AVRYSIEWKRPVDSCFDIDTVEGTISTNEMLDRESNRQHNISVVASKVNKPLLSDKVTVT
VNVLDVNEFPPELAVPFDTFVCENAEVGQVIQTISATDKDLPAVGQRFFFKSPREIRNRN
FTVRDFGNNTAEIVTKRVGFQRRVQEYYLMPVLVEDNGYPAQSTTGTLTIRVCACETDGS
LLSCTAEAVFLPMGLSTGAVMAILLCMVILLVIFVLYVGLRRQKKRETLMSSKEDIRDNV
IHYDDEGGGEEDTHAFDMGTLRNTKAIKEKMLRRGTGSEVTTQTEINESTPTTEGSAEVI
RDYIHQRLQENHLGFSAPPYDSLVTYAYEGDGSVAESLSSIESWMAEGGEDFKNLSECGP
PFKTLAGILDKDQADPPTAEVEES
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaggaacggtctcctgctggtcttttggtttctcttggacaaaggcttcctg
gctccccttcactctccaccccaaagcaggatgggcagagaacaccacctggggggcgtg
gcaggactgggactgaggagacatggggcatcaggggttcagagggtgaagcgaggatgg
gtgtggaaccagttctttgtactggaggaatatatgggatctgaaccacagtacgttgga
aagcttcacacagacctggacaggggtgacagcgaggtgaagtacactctctcaggagaa
ggagccggcaccatcttcaccatagaccagacgacgggcgacatccatgccttgatgggt
ctggacagagaggagaagtcttactacacattacgagcccaggctatggacatgcacaca
ggcaggcctctggagcctgagtctgaattcatcataaaagttcaagacatcaatgacaat
gaaccaaagttcttagagggcccatatacagccagtgtcccagagatgtcaccaggaggt
acttttgttatgcaggtgactgccacagatgctgacgaccccacctatgggaatagtgca
cggatcgtgtacagtatcctatacggacagccttacttttcagtcgactccaaaactggg
gtgataaggactgctttacccaacatggatcgtgaaatgaaggagctgtaccaggtcctt
attcaggccaaggatatgggcgggcagctggggggactagccggaacaaccaccatcaac
atcaccctcagcgacgtcaatgacaacccgcccaggttttcaaaaagtattttccacctc
agggtcccagaatcatcgtctgtgggctcagcagtagggaagatcagagctcatgacctg
gactctggcaggaatgcagaggtggaatattctatagttcctggggatgaaggaaaggtg
tttgatgtcacctccaacatgcacagtcaggagggaatcatagtccttagaaagcatctc
gactacgaaaacaaaaagtcgtacacctttaaagtggaggcctccaacgctcaccgggac
ccccggttcctccacctgggccctttcaaagacatcgccacagtcaaggtcaatgtgctg
gatgtggacgaaccccctgtgttcactaagacctcttacaccatagatgtgtatgaggac
actcctgtgggcaccatcattggatcagttactgcacaggacctagacgcaagcagcagt
gcagttaggtactctattgagtggaagaggcctgtggacagctgctttgacattgatact
gtggaagggaccatctccaccaacgagatgttggacagagagagtaataggcagcacaat
atctctgttgtggccagtaaagttaacaagcctctcctatccgacaaggtcacagtcaca
gtcaatgtgttggatgtcaacgagttccctccggagcttgccgttccctttgacactttt
gtctgtgaaaatgcagaagtaggccaggtaattcagaccatcagtgctacggacaaggat
cttcccgctgttggacagaggttcttcttcaagtcccctagggaaatcagaaacaggaat
ttcactgtgagagactttggaaataacacggcagagatagtgaccaagcgtgtggggttc
cagaggcgggtccaggagtactacttgatgcctgtgttggtggaggacaatgggtaccca
gcccagagcactaccggcaccctcacaatccgagtgtgtgcctgtgagactgacggatca
ctcctgtcctgcacggcagaggcagtcttcctaccaatgggcctcagcaccggggcagtg
atggccattttactgtgcatggtcatacttctggtgatcttcgtactctatgtcggcctg
agacggcagaagaagagagagacgttgatgtcgtccaaggaggacatccgggacaacgtg
atccactacgatgacgaggggggcggcgaggaggacacccacgccttcgacatgggcacc
ctgaggaacaccaaggccatcaaggaaaaaatgctccgcaggggcacagggtcagaggtc
accacccaaactgagatcaatgagtcgacccccaccacagagggcagcgcggaagtcatc
agggactacatccaccagcgtcttcaggagaaccacctgggtttctctgctccgccgtat
gactcactggtcacgtatgcctacgagggggatgggtcggtggccgagtcgctaagctcc
atcgagtcatggatggcagaaggtggagaggacttcaaaaacctcagcgagtgtgggccg
ccctttaaaactctggcggggatattagacaaagaccaagcagatcctcccacggcggaa
gtggaggagagctga
DBGET
integrated database retrieval system