Coregonus clupeaformis (lake whitefish): 121580941
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Entry
121580941 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: acidic leucine-rich nuclear phosphoprotein 32 family member B
KO
K18647
acidic leucine-rich nuclear phosphoprotein 32 family member B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121580941
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121580941
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121580941
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121580941
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
HTH_23
HTH_Tnp_Tc3_2
LRR_6
LRR_Zer-1
LRR_1
HTH_28
LRR_NXF1-5
HTH_8
DUF1722
HTH_32
YgjP-like
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
121580941
NCBI-ProteinID:
XP_045081207
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All DBs
Position
15:complement(62542573..62558767)
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AA seq
384 aa
AA seq
DB search
MGKKRDLMEFERGMIVGARRAGSSISQTAALLGFSRTTVSVVYREWRDKQKTSSQRQSSG
RKQLVDKRGRRRLERIVQANRRATIRQITAQYNSGVQNCISECTTRRSLSRMGYCSKRRA
NEEWKNTACVDKVKEAMEYTLHTKIVLNNCRLKXRKIGCSTEEFVNLKFXSLINVXLISV
SNLPKLGKLKNKLELSDNRISGGLDVLAEKLPNLTHLNLSGNKLKDISTLEPLKTLDSLK
CLDLFNCEVTNLNDYRESVFXLPQLTYLDRYDVKDRERLTDGDDEDDEGGTKDEDGEEED
FDEEDGRLSGDEEEVTLVFDDDDNDSNNPFPFLPEVEAVQGETRKQEPDDKNYEQKIRAN
VNNXLPLHPDTHPHPAYSKSLPQL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaagagagacctaatggagtttgagcgtggtatgatcgtcggtgccaggcgc
gccggatccagtatatcacaaacggcagcactcctgggcttttcacgcacgacagtgtct
gtggtttaccgagaatggcgcgacaaacaaaaaacatccagtcagcgacagtccagtggg
cgtaaacagctcgttgataagagaggtcgaaggagattggaaagaatagtgcaagctaac
agacgggccacaattagacaaataacggcgcagtacaacagtggtgtgcagaactgcatc
tcggaatgcacaactcgtcgatccttgtcacggatgggctattgcagcaaacggcgggca
aatgaggagtggaaaaacacagcctgtgtagataaggtaaaggaggcaatggaatacact
ttgcatacgaaaattgtcctgaacaactgcagactcaaatgaaggaaaatcggttgctct
acagaagaatttgtcaatctgaaatttnncagtttgataaacgttnnattaatctcagtt
tccaacctcccaaaacttgggaaactcaaaaataaattggaactcagtgacaacagaatc
tctggtggccttgatgtgctagcagagaaactccccaacctcacacatctaaatctaagt
gggaacaaactgaaggacatcagcacattggaacctttgaaaacgctggacagcctgaag
tgtctggacctgttcaactgtgaggtgaccaacctgaacgactacagggagagtgtgttc
nngctgcctcaactcacctacctggatcggtacgacgtgaaggaccgggagcgcctgacg
gatggggacgatgaagacgatgagggaggaacgaaggatgaggacggagaggaggaagac
tttgacgaggaggatggcaggctcagcggagatgaagaggaggtgaccttggtatttgat
gatgacgacaacgactcaaataaccctttcccatttctcccagaagttgaggctgtccaa
ggagagacgagaaagcaagagcctgatgacaaaaattatgagcaaaaaattagagctaac
gttaataacntccttcctctccaccctgacacccacccacaccctgcctactcaaagtct
ctcccccagctttga
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