Coregonus clupeaformis (lake whitefish): 121580978
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Entry
121580978 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 21
KO
K20315
Rho GTPase-activating protein 21/23
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121580978
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Others
Others
121580978
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121580978
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121580978
NCBI-ProteinID:
XP_041752164
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All DBs
Position
14:complement(34905352..34989497)
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AA seq
1881 aa
AA seq
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MMASRWKGPCDEEERLTRPSLCENNVLEWGERGDSPAGLFNLQGEEEPFSWPGPKTIHLR
RTSQGFGFTLRHFIVYPPESAVHPYPFPEEHGRRGRQRNRLEPMDTIFVKQVNEGGPAHG
AGLCTGDRIVKVNGESIIGKTYSQVIALIQNSDASLELCVMPKDEDILQLPFSQEPTDLA
YSQDAYLRGHSAYSGIARHIPEPPPICYPRVDCKPPGMAQATETPSPVGVQGACRGPGGA
PPPDLGYRIEIPVPPSPPPPAHPYPKSQTVACMRNDSVRTVVVPPELGHMGRMRPAHRVE
YGLVGPPDPDIIRGRPGSVSHYPLPRKTDIYPSGASRLNYGTPPPHYPPNSNSPNPGAHQ
NIDWRTYQTYREYIDNKGIHAYGSRTIQERLESLRAASQNTFNSSHYIPQGGWGPDPKGL
RRRSTSHDRAYHGPPPAFHHMPPRSSSQDRMSVAERGVHSRNWPPRSVSQDGFTHKVRAH
SSDYDYVDPLDLGRSMVDRRGYGSRADQSTRPSRQSLSKQAVHHRPPAGYGRDSLRGAPM
SNPALYTKGPEQLQHQPHSAPNMPQDRPYHLGKNISLEQSHTDQRAGVNHVSQSRGRAET
MQPPGEVPRREVAAVVGHRSSSLSAPHQRPQRPGILKTSYQHPRPEPQVNGRGALASESG
VVLREKPPGSGKNPSPLRHPSYILAVNEEDYSEPVAGAVCWLPNDARREMHMRRLSEKQE
KHQTSCSSSNLDESLDSIPFIDELASPSVDHEATSIPASALISAAPAITTVPPSPSSSPC
PLMRRQLSHDQESLRNAILESDAEAKQERSKSCDEGLDNYREEGRGRSNSKHMPSLRGLR
KALDGYKSSDDSGSRRDSSSDIFSDSSKEGWLNFRQINTEKSKRGGLRSWKQMYAVLRGH
GLTLYKDKRDGVSHASSQSDDDPQPISIKACLIDISYSDTKRKNVLRLTTSDCEYLFQAE
GRDDMLSWIRVIQENSNLDDENAGVTSQDLISRKIKEYNTMMSAPSSKTEPSPKTSRQSL
SIRHTLLGGKGEGKSQSPHSPKTGERDESSPPRDKAAWRRGIPGIMRKPFEKKTTAGVTF
GVRLDDCPPAQTNRFVPLIVDVCCKLVEERGLEYTGIYRVPGNNAAISSMQEELDNKGLM
SDIDIQEEKWRDLNVISSLLKSFFRKLPEPLFTNEKYADFIEANRTEDSVERLKELKRLI
LELPDHHYETLKFLSGHLKLVSENCEKNKMEPRNLAIVFGPTLVRTSEDNMTNMVNHMPD
QCKIVENLIQQYDWFFTEEGDDDPVTSVEQESTVQSQPVPNIDHLLSNIGRTTTTTSPGE
VSDSTCSDSSKSKQGLWGSGKDQCSREMLLSSFFVSRKRKKPKDKVQPSSSDDDLDAVLA
KKEEPEQSHRDLHPAWSPESQTEEEEREASERGEQPGDRFQTNGKESRSDSLMSQPSPKH
TPSLHTSSTRSPYASPSPSQSPSLGYRSQVTHQLSLSDPPSNYDEVSDLGTMNSTSSQAS
VTGPRVRHGRTGGLGPETVASGLGAEVSSITSDYSTTSSMTFLTGAELSTLSPEVRSVAE
SRGGDDADDERSELISEGRPMETDSESDLSVFVGGGKEAGPVEEICQSDVPDAPRPLPSY
RLIECDSLSRKKSAARQKIDSESSLDGGRSDKDSNRLSCVLGAVKERSTGSLSSSSRSES
EMGTEPAWRLKITDRLKFRMRTSADDMFGVGTQRSRSPEGRRDKKKNIRRRHTMGGQRDF
AELSVMGDWQEGMGMGGGSRAELSAVDRLKPKCSSQDFSIREWIARERHRTSNPEVSLDL
TEHQGALLHLRSPDPQDPNHPQAQEAPSSSLSDPLSPHQAPAELLNGDTGPQNKSLSLSA
TAHPHKLSGAQVVHSRFYQYL
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatcacgttggaaaggtccatgtgatgaagaggagagactgaccagaccctct
ttgtgcgagaataacgtgctggagtggggtgagcggggtgattcccctgcaggcctgttc
aacctgcagggagaggaggagcccttctcatggccgggtcccaagactatccatctgcgg
cgcacctctcagggcttcggcttcaccctgcgccacttcattgtctacccaccagagtct
gccgtgcacccttaccccttcccggaagagcatggccgcagagggagacaacggaacagg
ctggagccaatggacaccatctttgtgaagcaagtgaatgagggtggtcccgcccacgga
gctggactctgcacaggagaccggatagtaaaggtaaatggagaaagtatcattgggaaa
acgtactctcaggtcatagccttgatccaaaacagtgatgcctctcttgaactctgtgtg
atgccaaaagatgaagacatactgcagctgcctttttcacaggagcccactgatctggcc
tactcccaggatgcgtacctccgaggccacagtgcctacagtggaattgcccgtcacatc
cccgaaccgccccccatatgttaccccagagtagactgtaagcccccggggatggcccag
gctacagagaccccctccccggtgggggtacagggagcatgccgggggcctgggggggca
ccaccacccgacctggggtaccgcatagagatccccgtgcccccgtcccctcctcctcct
gcacacccgtaccccaaatcacagactgtggcatgcatgcgcaacgacagcgtgaggact
gtggtagttcctccagagctgggccatatgggccgtatgagaccagctcacagagtagag
tacggcctggtagggccccctgaccctgacatcatcagagggcgacctgggtctgtgtcc
cactaccccctgccacggaaaaccgacatctacccttctggtgcgagccgcctcaattac
ggcaccccaccaccccactacccacccaactctaactcccccaaccccggcgctcaccaa
aatattgactggcggacgtaccagacgtacagggagtacatcgacaacaagggtatccat
gcctacggcagccggaccatccaggagagactagagagcctgcgagccgccagtcagaac
accttcaactcctcccactacatcccccaggggggctgggggcccgaccccaaaggcctc
cgacgcaggagcacttcccacgaccgcgcctaccacggacccccacccgccttccaccac
atgccccctcgcagctcgtcccaggaccgtatgagtgtggcggagcggggggtccactcc
aggaactggccccctcgtagcgtgtcccaggatgggtttacccacaaggtccgggcccac
tcctctgactatgactatgtggaccctttggatctgggccggtccatggtggacagacgg
ggctacggtagcagggcggaccagagtacacgccccagcaggcagagcctctccaaacag
gctgtccatcatcgaccccctgcagggtacggtagggacagtctccggggggcaccaatg
tctaaccctgccctctacactaaaggaccagagcagctccagcaccagccgcacagtgcc
cctaacatgccccaagacagaccctatcacctggggaagaatatcagcttggagcaatcc
cacactgaccaaagagctggtgtgaaccatgtgagccagagtaggggacgggcagagacc
atgcagccgccaggggaggtgccaaggagagaggtggcagcggtggttgggcataggtcc
tcttccctctccgctccccatcagagaccgcagaggcctgggatcctcaaaacctcttac
cagcaccctcgcccagagccccaggtgaacgggcgtggcgccttagcctcagagtcaggt
gtggtgctcagggagaagcctcctgggtcgggaaagaatcccagccccctacgccaccct
tcctacatcctggcggtgaacgaggaggactactcggaaccagtggcgggtgcggtgtgc
tggctgcccaacgatgcgcggcgggagatgcacatgcggcggctgagcgagaagcaggaa
aagcaccagacttcctgctcctccagcaacctggacgaatccctcgactccatccccttc
atcgacgagctggctagccctagtgttgaccatgaggccacgtccattcctgcttccgcc
ctgatatctgccgctccagccataactacagtcccccctagcccaagctcctccccgtgc
cctctcatgcgccgacagctatcacatgaccaagagtctctcagaaatgctattctggag
tctgatgccgaggccaaacaagagaggtccaaatcctgcgacgagggcctggataactac
agagaggaaggcagaggccgatcaaacagtaaacacatgcccagtctgagaggcctgaga
aaggctctggatggatacaagtcatctgatgactctgggtccagaagggactcctcttca
gatatattcagtgactcttctaaagaaggctggctcaacttcaggcagatcaacactgag
aagagcaagcgtgggggtttgaggtcgtggaagcagatgtacgccgtgctgcgaggccac
ggcctcacgctttacaaggacaagagggacggcgtctcccacgcctcctcccagtccgac
gatgacccacagccaatcagtatcaaggcctgcctgattgacatatcctacagcgacacg
aaacggaagaacgtgctgcgtctgaccacgtcagactgcgagtatctgttccaggctgag
ggcagggatgacatgctgtcatggatcagagtcatccaggagaatagtaatctggatgat
gagaatgctggtgtaaccagccaggacctgatcagcagaaaaatcaaagagtacaacacc
atgatgagtgcccccagcagcaagactgagccttcccccaaaacctcccggcagtccctc
agtatcagacacaccctcctgggggggaagggagagggcaagagccagagcccccactca
cccaaaacaggagagagagatgaatccagtcctccacgggataaggctgcctggaggagg
ggtatccccggcatcatgaggaaaccctttgagaagaagaccactgctggggtcaccttt
ggggtgcgcctcgatgactgcccacctgcacaaaccaacaggtttgttcccctcattgtg
gatgtgtgctgtaagctggtagaggaaagagggctggagtacactgggatctacagagta
ccaggaaacaatgctgccatctccagcatgcaggaggagctggacaataaaggactgatg
agtgacatcgacatccaagaagaaaaatggagggacctcaacgtgatcagtagtttactg
aaatccttcttccgtaaacttcccgagccccttttcacaaatgaaaaatatgcagatttt
attgaagccaatcgaactgaagactcagtggagaggttaaaagaactgaagaggctgatt
cttgaattgcctgatcatcactatgaaaccctcaaatttctctctggacacctcaagttg
gtctccgaaaactgtgagaaaaataagatggagcctcgtaacctggccatcgtgtttggt
ccaaccctggtcagaacctcggaggacaacatgaccaacatggtcaaccacatgccagac
cagtgcaagatagtggagaacctcattcagcagtacgactggttcttcactgaggagggg
gatgatgaccctgttacctcagtggaacaggagagtacagtgcagtctcagcctgtgccc
aacatcgaccacctgctgtccaacatcggccgtaccacaaccaccacctcgcctggggaa
gtctcagattcaacatgtagtgactcctccaaatcaaagcagggcttgtgggggtctggg
aaggaccagtgtagcagggagatgctgctctcctccttctttgtcagtcgcaaacgtaag
aagcccaaggacaaggttcagcccagcagctctgacgacgacctggacgccgtgttggct
aagaaagaggagccagaacagagccaccgggacctccaccccgcctggtccccagagagc
cagacagaggaggaggagagggaggccagcgagagaggggaacagccaggggacaggttc
caaaccaacgggaaagagtctcgttcagacagccttatgtctcagccctctcccaaacac
acccccagcctccatacctcctctacccgctccccctatgcctcaccctccccctcccag
tcccccagccttggctatcgcagccaggtgacccaccagttgtccctgtcggaccccccc
tccaactacgatgaggtctcagacctgggcaccatgaacagcaccagctcccaggcgtct
gtcacaggtcccagggtgcggcatggcaggacagggggcctggggccagagacggtggcc
agcggcctgggggcagaggtcagctccatcacctcagactactccaccacctcctctatg
accttcctgacaggggccgagctgagcacgctcagtccagaggtacgctcggtggctgag
agcaggggaggagacgacgctgatgatgagcgtagtgagctgattagtgagggccggccc
atggagacggacagcgaaagcgacctatcagtgtttgttgggggcgggaaggaggcaggg
ccggtggaggagatctgccaatcagacgtgccggacgcacccaggcccctcccctcctac
agactcattgaatgtgactctctctctagaaagaagtcagcagcacggcagaagattgac
agcgagtcctcattggatggagggcggagcgacaaggactccaataggctgtcttgcgtt
ctgggggcagttaaggagcgttccactggcagccttagctcctcctcccgcagcgagtca
gagatggggactgagcctgcatggcgtctcaagatcacagaccgtcttaagttccgaatg
cggacgtctgcggacgacatgttcggggtgggcacccagcggagccgctctccagaggga
cgcagggacaagaagaagaacatcagacgcagacacaccatgggaggccagagggacttt
gctgagctgtctgtgatgggggactggcaggagggcatggggatgggcgggggctcgcgg
gcggagctgtcggccgtggaccggctgaagcccaagtgttcttcccaggacttctccatc
cgggagtggattgcccgcgagcgccaccgcacctccaacccagaggtcagcctggactta
actgaacaccagggggcgctactccacctccgcagccccgacccccaggaccccaaccac
ccccaggcccaggaggccccgtcgtcttccctctcagaccccctctcaccacaccaagct
ccagctgagctgctgaatggagacacaggcccccagaataaaagcctgagcctgtcagcc
accgcacacccacacaaactctctggcgcccaggtggtccactctcgcttctaccagtac
ctgtga
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