Coregonus clupeaformis (lake whitefish): 121580997
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Entry
121580997 CDS
T08357
Name
(RefSeq) cadherin-2
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121580997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121580997
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121580997
04090 CD molecules [BR:
cclu04090
]
121580997
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121580997
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121580997
CD molecules [BR:
cclu04090
]
Proteins
121580997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
RibLong
DUF2304
Stevor
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
121580997
NCBI-ProteinID:
XP_041752208
LinkDB
All DBs
Position
14:33231069..33329605
Genome browser
AA seq
914 aa
AA seq
DB search
MYLYEGRGLLLLTLLAALQIATEGRGTPPLCWPGFSEDVYVAAVPESAEKGQPLFNVKFV
NCGQGGLVRFECSNPSNFRIDADGVVYALRPLTLSTLRAVPLVIVARDETNQQQWQTQVR
LTPPVGQIQQAQDIQAPPTLSQGLQEIWFPSRQTDSSSVGQLKRMKRDWVIPPINVPENS
RGEFPQDLVRIRSDNDKNRSLRYSVTGPGADQPPTGIFIIHPISGELSVMKPLDREHISN
FHLRAHAVDLNGNQVESPIDIVINVIDMNDNRPEFIHQIWNGTVPEGSKPGTFVMTVTSV
DKDDPKTANGMLRYKIVSQNPESPTSNMFTINNKTGGIITVAAGLDREKVPQYTLIIQAT
DMEGNPMYGLSNTATAVIKVTDINDNPPEFTAEMFFGEVPENRVNVIVANLTVTDKDQPN
TPAWNAVYKITGGDPTGRFSVPTDPTTNEGLVTVVKPIDYEISRTYMLTVVAVNEVSLAR
GIHSPRQSTATVSIRVIDVNESPYFDPNPKLIKLEEGMLAESTLTTFTAQDPDRFMPQSI
RYSRLSDPANWLRIDPNTGRITTIAVLDRESPYVKDNMYSATFLASDNGVPPASGTGTLQ
ISLLDINDNAPHVYPQETEMCEKPEPNGINITALDGDLNPNAGPFAFELANRPSDVRRNW
TFTRLSGDYAQLSLKIGFLERGIYEIPIIITDSGNLPMSNTSYLRVKVCQCDHNGDCTDQ
QHIIAAGLGTGAIIAILLCIIILLILVLLFVVWMKRRDKERQAKQLLIDPEDDVRDNILK
YDEEGGGEEDQDYDLSQLQQPDTIEPDTIKPVGIRRMDERPLHPEPKYPIRSAAPHPGDI
GDFINEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLNSSSSGGDQDYDYLNDWGP
RFRKLADMYGGSDD
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtacttatacgagggcaggggactgcttctgctcacgctcttggctgctttgcagatc
gcaacggagggcaggggcacccctcctctgtgctggcccggcttctctgaagatgtgtat
gtcgcggcggtgccagagagtgcagagaagggacagccccttttcaatgtgaagtttgtg
aactgcggccaaggtgggctggtgcggttcgagtgcagtaacccgtccaacttccggata
gatgctgacggggtcgtctacgccctcaggcctttgaccttgtccaccctccgggcagtg
cccctagtgatcgtagccagggacgagaccaatcagcagcaatggcagacccaagtgaga
ctgacgccccctgtaggccagattcagcaggcccaggacatccaagctcccccaactctt
tcccagggtctccaggagatctggttcccatcgcggcagacagacagcagctccgtgggc
cagctcaaacgcatgaagagagactgggtcatccccccaatcaacgtccccgagaactcc
agaggagagttcccccaggacctggtccggatccggtcggacaatgacaagaaccgctcc
ctgaggtacagtgtgaccggacccggagctgaccagccgcccaccggcatcttcataatc
caccccatctccggagagctgtctgtcatgaaacccctggacagagaacacatatccaac
ttccacctgagagcccatgctgtggatctgaacggtaaccaggtagagagccccatcgac
attgtgatcaatgtgattgacatgaacgacaaccggccagagttcatccatcagatctgg
aacggcaccgttcccgaaggctccaaaccagggacctttgttatgacagtaacgtctgtt
gacaaagacgaccccaaaacagccaatgggatgctgcgctacaagatcgtatcccagaat
cccgagagcccgacatccaacatgttcaccattaacaacaagacaggaggcattattacc
gtcgcagccggcctggacagagagaaagtgcctcagtacacgttgatcatccaggccaca
gacatggagggcaaccccatgtacggcctgtccaacactgccacggccgtcatcaaagtg
accgacatcaacgacaacccaccagagttcactgccgagatgttctttggagaggtgcct
gagaaccgggtgaatgtcatcgtggccaacctgacggtgacggacaaagaccagcccaac
acgccagcgtggaacgccgtctacaagatcactgggggcgaccccaccggcaggttctcc
gtgccaaccgatcccaccactaacgagggcctggtaaccgttgtcaagccaatcgactat
gagatcagcaggacatacatgttgacggtggtagcggtgaatgaggtgtctctcgcccgg
ggtatccactcccctcgccagtccaccgccacggtctccatcagggtcatcgatgtcaac
gagagcccctacttcgaccccaaccccaaactcatcaaattggaggaggggatgttagca
gaatctacactgaccaccttcacagcacaggaccctgatagattcatgccgcaaagcatt
agatactccaggctctcagacccagccaactggctaagaatcgaccctaacaccgggcgc
atcacaaccatcgctgtcctggaccgcgagtcgccctacgtgaaggacaacatgtacagc
gccaccttcttggcatctgacaatggcgtccccccagcgagcggtacaggcaccctgcag
atctccctgctggacatcaacgacaatgcgccccacgtctacccccaggagaccgagatg
tgcgagaaacccgagcccaacggcatcaacatcacagcgctggacggagacctcaacccc
aacgccggacccttcgcgttcgagctggccaacaggccctcagacgtcaggagaaactgg
accttcacacggctcagtggtgactatgcccagttgagcctgaagatcggcttcctggaa
aggggcatctacgagatccccatcatcatcactgactctggcaacctgcccatgtccaac
acctcctacctgcgggtcaaggtgtgccagtgtgaccacaacggggactgcaccgaccag
cagcacatcatcgccgcagggctgggcacgggcgccatcatcgccatcctgctctgcatc
atcatcctcctcattctggtgttgttgtttgtggtatggatgaagcgtcgtgataaggag
cgtcaggccaagcagctgctcattgacccggaggacgacgtcagagacaacatcctgaag
tacgacgaggagggaggtggagaggaggaccaggattacgacctgagccagctccagcag
cccgacacaatagagccggacaccatcaagcctgtggggatccggcgtatggacgagagg
ccgctgcaccccgagcccaagtaccccataaggtcagcagccccgcaccccggggacatc
ggagacttcatcaacgagggacttaaggcagcggacaacgaccccacagccccgccctac
gactccctgctggtgttcgactatgaaggcagtggctctacagctggctccctaagctct
ctcaactcctccagcagcggaggggaccaggactacgattacctcaacgattggggccct
cgcttcagaaaactcgcagacatgtacggagggagcgacgactag
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