Coregonus clupeaformis (lake whitefish): 121581058
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Entry
121581058 CDS
T08357
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121581058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121581058
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
RNases
121581058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
Phosphodiest
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
121581058
NCBI-ProteinID:
XP_041752365
LinkDB
All DBs
Position
1:complement(98918474..98932531)
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AA seq
902 aa
AA seq
DB search
MASPVCLKRKREPSPTPESSKRVKEIDRNGVPESEHRSRPPRLTLPFDRLQEPVTLKDLT
ELLQFAALGKTGGLKQPSWCHLHHQRKVSGLSVVVLEGLSQAHFYRHYLYFKHLRTKYTS
RHSYTPSPGNVISGIFSSEVVGNSSPAGALGDQTSAQPEGGLRWHPVIRKFGLESRGLTG
YLLTQEEMIKKHFPVHGMPGSEGFVCTDSDDCVTDSSPLYGLDCEMCLTERGNELTRISL
VDSRGSCVLDELVKPPNRILNYLTQFSGITRAMLQPITTTLREVQSKLKKVLPRDAVLVG
HSLDNDLRALNLIHPHVIDTSLLYRREFGQRFKLKVLAETVLKKQIQTEERRGHDPTEDA
QAALELAQYFIHTGPRQVVELYCEELWGGSPAMYQPPVNRSTSTHKHNNRFAEVLKSSGQ
SALFIGKRAEITLALSNQQWHSSDREVLSSFKRGLESHSFSVVQLSSFSDHLKSMISTDQ
HYHTMSQRLREMCVVFAGPLPSDYTERDVRRLFSSRGTVRAVRLLNATQRMHAEVEFELL
EGAVLAVEMLNGTLLHNGHIIKVQRPVKESTLDLDVFLSCLQDDPLNANVIYAAGLKANA
KTARLAAKVNGTGLNAEAAAKVNETWLNANAAAKFNGTGLNANVAALPDKVNRARLHAKA
NHSGLLEKVNGTLLNAKAKLAEANGPGLHAKAKFAKLAELSAEVNGTLLKAKAMLAEIAA
EAKVGARLQAKTAGLCEEDLREAFGRYGAVKGVILPAKHSGKQKRRRHAFLKYDSPDTVD
AVLSSPVELWDRKVSTRRALTPPHLCSWVTMMTTTGSDRETPDESSQETGREEQEVACVM
RKLDRRVGKLFRSLPDNTLSIVLLPGHNSSHGDGLCFLEVKQGSAALSDHAHNLNTDQFP
DT
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaccagtctgtctcaagagaaagagggaaccttccccaacaccagagagcagt
aaacgagtgaaagagatagaccgtaacggagttccagagtctgagcaccgttcccgtccc
ccacggctcacgctgccgtttgaccgtctccaggaaccggtcacgttgaaagatctgacg
gaactgcttcagtttgctgctctggggaaaaccggtgggctgaaacaacccagttggtgt
cacctccaccaccagagaaaggtatcagggttgagcgtggtggttctagaaggactgagc
caggcccacttctacagacactacctgtacttcaaacacctccgcaccaagtacacctct
agacacagttacactccatcgcctggcaacgtgatttctggaatattcagcagtgaagtt
gttggcaacagtagtcccgctggtgcgctaggagaccagacgagtgcccagccagaggga
ggtctgcggtggcacccagtgatcaggaagtttggtctggagagcagagggctgactgga
tacctactcacccaggaggagatgatcaagaaacacttccctgtccacggtatgcctggc
agtgagggctttgtgtgtacagacagtgatgactgtgtgactgacagtagtcctctctat
gggctggactgtgagatgtgtctgacagagcggggcaacgagctgacgcgtatctctcta
gtagacagcagagggagctgtgttctggacgagctggtcaaacctcccaaccgcatctta
aactaccttacacagttctctggtatcacccgtgcaatgttgcagccaatcaccaccacc
cttagggaagtccaatcaaagctcaagaaggtgttgccgcgggacgcggtcctggttggc
cactcccttgacaacgacctcagggccctgaacctgatccacccccatgtgattgacacc
tccctgctgtacaggagagagtttggacagaggtttaaactcaaggtgctggctgagacc
gtgctcaagaagcagatccagacagaggagaggaggggtcatgaccccacagaggacgcc
caggctgccctggaactggcccagtacttcatacacactggaccacgacaggtagtggag
ctgtattgtgaagagctgtggggtgggagtcctgctatgtaccagcctcctgtcaacaga
tcaacatctacacacaaacacaacaacaggtttgcagaggtcctgaagagttctggccaa
tcagccctgtttatagggaagcgtgctgaaatcaccctggctctatccaatcagcagtgg
cacagctcagacagagaggtcctgtcttcctttaaaagaggactagagtctcactcgttc
agcgttgtccagttgtcttccttctctgaccatctgaagtctatgatctctactgaccag
cactaccacacgatgtctcagcgtctgagagagatgtgtgtggtgtttgcagggccgttg
cctagcgactacacagagagggatgtgaggaggctgttcagcagccgtggaaccgtacgg
gctgtcaggctgctgaacgctacacagcggatgcatgcggaggtagagtttgagctgttg
gagggagctgtgctggctgtagagatgctcaacggaacactgctacacaacggacacatc
atcaaggtccaaagacctgtaaaggagtccacgctggatctggacgtctttctgagttgc
ctgcaggacgacccgctaaatgctaacgtcatctacgccgcagggctaaaggctaacgct
aaaacagcacggcttgcagccaaagtcaatgggactgggctaaatgctgaagcagcagct
aaagtcaatgagacttggctaaatgctaacgcagcagctaaattcaatggcactgggcta
aatgctaacgtagcagcactcccagataaggtcaatagagctaggctacacgctaaagcg
aaccattcagggctcttagagaaagtcaatggaactttgctaaatgctaaagctaagcta
gcagaagcgaatggacccgggctacatgctaaagcaaaatttgctaagctagcagagctc
tcagctgaagtcaatggaactctgctcaaagcgaaagctatgctagcagagatagcagcc
gaagccaaggttggagcgaggctacaggctaagactgccggactctgtgaagaggacctc
cgtgaggccttcggacggtacggagcggtcaagggcgtaattctacctgcaaagcactct
gggaaacagaaacgtaggagacatgctttcttaaagtatgatagtcctgacacagtggac
gcggtccttagctcacctgtggaactctgggacaggaaggtgagcacccgcagagccctg
actccgccccacctgtgctcctgggttactatgatgacgacgactgggtccgacagagag
acgccggacgagtcctcacaggaaactggaagagaggaacaggaagtggcgtgtgtgatg
aggaagttggaccggcgcgtggggaagctgttcagatctctacctgacaacaccctcagc
atcgtactgctgcctgggcacaacagttcccatggcgatggtctgtgtttcctggaggtc
aaacaggggtcagcagcactcagtgaccacgctcacaatctgaacacggaccaattccct
gacacgtga
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