Coregonus clupeaformis (lake whitefish): 121581061
Help
Entry
121581061 CDS
T08357
Name
(RefSeq) GREB1-like protein
KO
K27478
GREB1-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121581061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cpSF2-GREB1
GREB1_2nd
GREB1_C
GREB1_N
TAGT
Pox_A3L
Motif
Other DBs
NCBI-GeneID:
121581061
NCBI-ProteinID:
XP_041752358
LinkDB
All DBs
Position
14:complement(28038316..28123500)
Genome browser
AA seq
1961 aa
AA seq
DB search
MGNSYAGQLKSARFEEALHNSIKASLRSSSGDPQPIFTQLYLEPDQYPGNMDDIKPKVDL
YLPCGEPTGQDLLNGQASNGLEELEEEDDSDTSSPPLPYLHQGPTPDGCCTMDGFCQAGK
DLRLVSMAMEPIEVPAGFELVGAKSSSVPEHILVCAVDRRFLPDENGKNALLGFSGNCVG
CGEKGFRYFTEFSNHINLKLATQPKKQKHLKYYLVKNSQGALCKGPLICWKDCKTRQFSS
SSVSTSKPSSSSSLISKENGGTNGHSSSPFSLSDSPPTRTPSAASVFFSAQDLARDCSFL
KPLASTSGGKTLPIVPTALRVNGPPNGLGADSHPTLLSPSQVSLGPQGQGYRTSDLGDNP
VSSAMISGPPKKRHRGWHPNPLVPVPPTAVPVPAIRPIVCSPGSVLAMPTPQLPVAGVLQ
PQPLTAGETVIVPDNLLNTSGVRPVILIGHGTLPYFYGNVGDIVVSPLLVSCYKGNQLTE
KTLASLGLTGSQLLSVETMILLTLQYLARLGSEQIPLREEFEQIVLKAMLVCPGGPSISP
AQLPWLARLEASVSGGSVQVLVTYNSLGEGISESLRSLCDGPPYQQCLPTYVVIVCTSKM
SGNEFCVLVLGKYQARALAEGMLTTNEFLKEISYELITGKVSVLASHFKTTSLGDNLDKQ
LVRIQRRRKGQVIQPFQGDVTDHIHSHEAATMVPPSESELLSEVFQIHPPQLSVARSLLS
QVCSIADSGSQSLDLGRFCKVDFLVLVPPSHVLVNQTAQRIRQSGVLVDLGIEDASSAHQ
RSDKYVVRLDGEVHGKMEAFMRKVKQNPYTLFVLIHDNSHVDLTSALSGSVCHGELQGLA
DRVVNCQEVLEAMNLLVLQVSCFPFTLQTRQSRISVHNEVHWPANTGELSLKELVYFGLR
DYSSSLQWGVASPILRCDDAFEKMISTLLERHPHLHSMVIRSYLLIQQYTEAMMALTSSP
SLRDHITPETLAMVEDLISAPGREGTRGRGHMLLVRVPSLQLAMLARERLEDVRDKLGLQ
FCFAVLLGSPAAELSLPRHFANRLRAWRGCESEDWVPHTYEDLEGLPCIVILTGKDPLGE
TFPRSLKYCDLRLIDSSYLTRTALEQEVGLACSYVSLGLVKEPCRSMAPRDPETDKTSGP
QDPDLELHMDLERPQSNGSVATKGSGSLAENRVSSSDIPDSSQKPSTSSCHPGGKAGSIM
MEEGTGPGTTSSSPRRVKQECDSLGSATPRPSNAPPSFCSSSSSSSSPSSSSTQHPSQST
QCGRGSKSPRVSPRTVILSRAAYNLLAGESGSQLSSFSLLPHADVGWSSPLRPLFTPNLQ
GSEQSLFYRQWTVARQHHADHEAPPGPHPRRLLLSGPPQVGKTGAYLQFLRILFRMLIRL
LEVDVYDEEEELEEAMTDMSEATPPASTQWPDIEEIRKLPFDLFPRDPKFRRASAVYTDK
MQKGLKDPKLEGESKMPVKRETVSIRLSMFAAHNAFHHCEQCHHYCEASPATQLSECTFH
AFTFCSSMLGEEVQLHFIIPKAKEKHFVFSQQGSHLESMRLPLVSAKDPSLLKSPIFTPT
TGRQEHGLLNIFHAMEGTAHLHILVVKQYEMHHYRKYWPNHILLVLPAMFNSAGVGAARF
MIKELSYHNLELERNRLEEQGVKRQDVWPFIVMMDDSCVLWNAHQPQDSSSDMADTGPSL
TNVSLKTVLQHMEATPKISLYAMCGARKWSSALARRLPALPFSRCHLHDFVMLNIELTQN
VQYDLNRYSCEEVDFNLRANSSGLLLCRFNHFSLMKKQIPFGGHKDFLVKPKLMVMENPT
PISPPQYICAPDSEHTLLAAPAQFLLEKFLQSCSHRLFPKAVQNSSNPVLSIDSYLNIGP
EVSVCYVSSRPHSINLDHQGLVFSGLLLYLCDSFVVSGLLKKFSFLKGATLCVICQDRNS
LRQTIVRLELEDKWQFRLRDEFQTANCSEDRPLYFLTGRHV
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atggggaattcgtacgcagggcagctgaaatctgctcgcttcgaggaggccctccacaac
tccatcaaggcctccctacgctccagcagtggagacccacagcccatcttcactcagcta
tacctggagcctgaccagtatcctggcaacatggatgatataaagcccaaggtggacctg
tacctgccgtgcggggagcctacgggtcaggatctgctaaacggccaggcctctaacggt
ctggaggagctggaggaggaggacgactctgacaccagcagccctcccctgccctaccta
caccagggccccacgcccgacggctgctgcactatggatgggttctgtcaggctggaaag
gacctccgtctggtctccatggcgatggaaccgatcgaagtcccagctggcttcgagctt
gtcggtgccaagtcctccagcgtcccagagcacatcctggtgtgtgccgtggacaggcgg
tttctgcctgatgagaacgggaaaaatgcacttttagggttttcagggaactgtgttggc
tgtggggagaaggggttccggtactttactgagttctccaaccacatcaacctgaagctg
gccacacagcccaagaagcagaagcacttaaagtactacctggtgaagaactctcagggt
gctctgtgcaaaggacccctcatctgctggaaagactgcaagacgcgtcagttctccagc
agcagtgtgtccacctccaagcccagctcctcatcctccctgatcagcaaggagaatgga
ggcaccaacggacacagctcttcccctttttccctctcagactccccacctactaggact
ccctctgccgcctctgtgttcttctcagcccaggacctggcccgagactgcagcttcctc
aagcctctggcctctacctctgggggcaagactctaccaatagtacccacggctttaaga
gtgaacgggccgcccaacggactgggtgcagacagccaccccactttattgagcccctcc
caggtgtctctgggaccccagggacaggggtacagaacctccgacctaggagacaaccct
gtttcctctgcaatgatctcaggcccgcccaagaagcgccaccgcggttggcaccctaac
cccctggtgccagtcccccctacagccgtccctgtgcccgccatccgacccatcgtctgc
tccccaggctctgtgctggccatgcccactcctcagctgcctgtagcaggggtccttcag
ccccaacccctcactgctggagagactgtcatcgtccctgacaacctgctcaacacctca
ggagtccggcctgttatcctcatcgggcacggcacattaccatacttctatgggaacgtg
ggggacattgtggtgagccccctgctggtgagctgctataagggcaaccagttgactgag
aagacactggccagcctgggactgactggcagccagctactcagtgtggagaccatgatc
ctcctcaccctgcagtaccttgcacggctaggttcggagcagatccctctgagggaggag
tttgagcagatcgtgctgaaggccatgttagtttgtcctggaggtccctccatctctccg
gcccagctgccctggctggcccgcctggaggccagtgtctctgggggcagtgtccaggtc
ctggtcacctacaactccctgggggaaggcatctcggagtccctgcgctcactttgtgac
gggccgccctaccagcagtgcctgcccacctacgtggttattgtgtgtacctccaagatg
agcggcaacgagttctgtgtgctcgtgctggggaagtaccaggcacgagcgctagccgag
gggatgctcaccaccaatgagttcctgaaggagatcagctacgagctcataacagggaaa
gtcagtgtcctggcgtctcacttcaaaaccacctcactaggagacaacctggacaagcag
ctggtgcgtatccagcggcgacggaagggccaggtcatccagcctttccagggcgatgtc
actgaccacatccactcccatgaggcagccaccatggtgccaccctccgagtcagagctg
ctgagtgaggtgtttcagatccaccctccccagctcagtgtagctaggagcctgctctcc
caggtgtgctccatagcagactcaggcagccagagtctggacctgggacgcttctgcaag
gtggacttcctggttctggttcccccgtctcacgtcctggtgaaccagaccgctcaacgc
atccgacaatcaggagttctagtcgacctgggtatagaggatgcgtcctcagcccaccag
aggtccgacaagtatgtggtgcgtctagacggagaagtccacggcaagatggaggccttc
atgaggaaggtcaaacagaacccctacaccctgtttgtcctcatccacgacaactcccac
gtggacctgaccagtgccctgtccggttcggtgtgccatggggagcttcagggtctggct
gacagggtggtaaactgccaggaggtcctggaggctatgaacctgctggttctgcaggtc
agctgcttcccattcaccctgcagacaagacagtcccgcatcagcgtccacaatgaggtg
cactggccagccaacacaggggagctgtctcttaaggagctggtgtactttggcctgagg
gactacagcagctctctgcagtggggggtggccagccccatcctgcgctgtgacgacgcc
ttcgagaagatgatcagcacactgctggagagacacccccacctacacagcatggtgatc
aggagctacctgttgatccagcagtacacggaagccatgatggctctaacctcctcacct
tcactacgggaccacatcaccccagagaccctggccatggtggaggatctgatcagtgcc
ccgggccgggaggggaccaggggccggggccacatgctgctggtccgggtgccctctctg
cagctggccatgctggcccgggagcgcctggaggacgtcagggacaagctgggtcttcag
ttctgcttcgccgtgctgctggggagccctgccgccgagctcagccttccacgacacttc
gctaaccgactcagggcctggcggggctgtgaaagtgaagactgggtccctcacacctat
gaggatctggagggtcttccctgcattgtcatcctcactggaaaagaccctctaggagaa
acctttccaaggtccctgaagtactgtgacctgcgtctgatcgactccagctacctgacg
cgtacggccctggagcaggaggtgggtctggcctgctcctacgtgtccctggggttggta
aaggagccctgcaggtccatggcccccagggacccagagacagataagaccagcggcccc
caggatccagacctagagctgcacatggacctggagaggccccagagcaacggcagcgtt
gctaccaaaggctccggttctctggcagagaacagggtcagctcctctgacatccctgac
tcctcccagaagccttccacctcctcctgccaccccggaggcaaggcgggcagcatcatg
atggaagaagggacaggtccgggcacgacctcatcctccccccgccgggtcaaacaggag
tgtgactccctgggcagtgccaccccccgcccctccaacgcccctccctccttctgctcc
tcctcctcctcttcctcctccccctcctcctcttcgacccagcaccccagccagtctacg
caatgcggccgcggcagcaagtcgcctcgggtctctccccggactgtcatcctgtcgcga
gcggcctacaacctcctggcaggagaatcagggagccagctgagctccttctccctgctg
cctcacgccgatgtgggctggagcagcccactgaggcccctcttcacccctaacttacaa
gggtcagagcagagcctcttctacagacagtggaccgtagccaggcagcaccatgccgac
cacgaggcccccccggggccacacccacgacgcctgctgctcagcggacccccacaggtg
gggaagacaggtgcctacctgcagtttctacgcatcctgttccgcatgttgattcgactg
cttgaggtggatgtgtatgatgaagaggaggagctggaggaagcgatgacggatatgtcc
gaggccacacccccagccagcacccagtggccagacatcgaggagatccgcaaactgccc
ttcgacctcttccccagagatcctaaattcagaagggccagcgctgtttacactgacaag
atgcaaaagggcttgaaagatcctaaactggaaggagagagcaaaatgcctgtgaagagg
gaaacggtgtcgatacggctgagtatgttcgcagcccacaatgcatttcaccattgtgag
cagtgtcaccattactgtgaagccagcccagccacacagctgtcagagtgcaccttccac
gccttcacgttctgctcttccatgctgggagaggaggttcagcttcacttcatcatcccc
aaggccaaggagaagcactttgtcttcagccagcagggaagccacctggagagcatgagg
ctgcccctcgtctctgctaaggaccccagtctgttgaaaagtcccatcttcaccccgacc
acggggcgccaggagcacggccttctcaacatctttcacgccatggagggcaccgcccac
ctccacatcctagtggtcaagcagtatgagatgcaccactacaggaaatactggcccaac
cacatcctgctggtgctgcctgccatgttcaacagcgccggagttggggcggctcgtttc
atgatcaaggagctgtcgtaccacaacctggagctggagaggaaccgtctggaggagcag
ggggtcaagaggcaggacgtctggccctttatagtaatgatggatgactcctgtgtgctc
tggaacgcacaccaaccccaggacagcagcagtgatatggcagacactgggcccagtctg
accaacgtgtctttaaagactgtgctgcagcacatggaggccactcctaagatctccctc
tacgccatgtgtggcgcccgcaagtggagcagtgccctggcccgccgcctgccagccctg
cccttctcccgatgccaccttcacgactttgtcatgctcaacattgagctgacgcagaac
gtccagtacgacctcaacaggtacagttgtgaggaggtggacttcaacctgagagctaac
agcagtggtctgctgctctgtcgcttcaaccacttcagcttgatgaagaaacaaattccc
tttggaggacacaaggacttcctggtcaaacccaaactcatggtgatggagaacccaaca
cccatcagcccgccccagtatatctgtgccccagacagtgaacacaccctcctggccgcc
ccggctcagttcctcctggagaagtttctccagagctgcagccacagactgttccccaag
gcagtacagaacagtagcaaccccgtgctgtccatagacagctacctcaacataggccct
gaggtgtcagtgtgctacgtcagctccagaccacactccattaacctggaccaccagggt
ctggtcttcagtggcctgctgctctacctgtgtgactcctttgtcgtctctggcctcctc
aaaaagttcagcttcctcaaaggtgccacgttgtgtgtgatctgccaggaccgtaactct
ctgcgtcagacaatcgtgcggctggagctggaggacaagtggcagtttcgtctgcgggat
gagttccagacggccaactgcagcgaggaccggcccctctactttctcacaggacgccat
gtttga
DBGET
integrated database retrieval system