Coregonus clupeaformis (lake whitefish): 121581063
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Entry
121581063 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121581063
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121581063
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121581063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_5
Ank
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Prok-RING_4
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
121581063
NCBI-ProteinID:
XP_041752360
LinkDB
All DBs
Position
14:complement(27898977..27984477)
Genome browser
AA seq
1042 aa
AA seq
DB search
MTTGRNNRVMMEGVGARVIRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRIFDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIYTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEGVAAGAEGGSSQFLVGDLVQICYDIDRIKLLQRGHGEWA
EAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKVAPAGSAVSNASGERLSQLL
KKLFETQESGDINEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDV
LKLLLKHNVDLEAEDKDGDRAVHHASFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVN
KGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNA
LHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASL
DIQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQ
DMQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLC
PDPSLCKALAKCHKEKTSGQVGSRSPSLNSNSETLEECMVCSDMKRDTLFGPCGHIATCS
LCSPRVKKCLICKDQVQSRTKIEECVVCSDKKAAVLFEPCGHMCACENCASLMKKCVQCR
AVVERRTPFVLCCGGKGMEDDAADDDDDDEDDEDLTGSSNSALMAGGSQQDLLQPNNLAL
SWSSGNIPAMQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFMCGHGTCQL
CGDRMSECPICRKAIERRILLY
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgactactggcaggaataaccgtgtgatgatggaaggagttggtgcgagagtgatccgt
ggacccgattggaaatggggaaaacaggatggtggagagggacatgtcggcactgtcagg
agtttcgaaagtccggaagaagtggttgttgtctgggataacgggactgcggccaactac
cggtgctctggtgcatacgacgtgaggatatttgacagtgctcccacaggtatcaagcat
gacggtaccatgtgtgacacctgccgtcagcagcctattatcggtatccgctggaagtgt
gccgagtgcaccaactatgacctctgtaccacctgttaccatggagacaagcaccacctg
cgacaccgcttctacaggatcaccacccctggtagcgagagagtcctgttggagtctcgc
cgcaagtcgaagaagatcacagcccgaggcatctacacaggtggccgggtggtgagggga
gtggactggcagtgggaggaccaggatggaggcaacggcaggagaggaaaggtgacagag
atccaggactggagtgcagccagcccccacagtgcagcctacgtcctctgggacaacggg
gccaagaacctctacagagtgggcttcgaggggatgtcggatttgaaatgtgtccaggat
gccaaaggaggctctttctacagagaccactgccctgttctaggtgagcagaatggcaac
aggaacccaggcggtctgcagattggagacctggtcaacatcgacctggacctggagata
gtccagtccttgcagcacggccacggaggctggacagacggcatgttcgagaccctcacc
accactggtaccgtgtgtggaatcgacgaggaccacgacattgtggtgcagtaccccagt
gggaacaggtggacgttcaaccctgcggtgctgaccaaggccaacgttgtgcgtagtggg
gaaggtgttgcggcaggggcggagggcggcagctcccagttcctggtaggagacctggtc
cagatctgctacgacatcgaccgcattaagctgctgcagagaggacacggggagtgggcc
gaggcaatgctgcctaccctgggcaaggtgggccgcgtgcagcagatctactccgacagc
gacctgaaggtggaggtgtgcggaacgtcatggacctacaaccccgctgccgtcaccaaa
gtggcccccgctggctccgctgtttccaacgcctccggagagcgtctttctcagctgctg
aagaagctgtttgagacccaggagtctggtgacatcaatgaggagctggtcaaagcagca
gccaatggcgacctggccaaggtggaggacatcctcaagagacctgacgtggacgtgaat
ggtcagtgtgctggacacacagccatgcaggcggccagtcagaacggacacgtggacgtc
ctcaagctgctgctgaaacacaacgtggacctggaggctgaggacaaggatggagaccgg
gcggtgcaccacgcgtccttcggagacgaggggtctgtgatcgaagtgctgcagaggggt
ggggccgacctgaacgccaggaacaagcgcagacagacccccctgcacatcgctgtcaac
aagggccatctgcaggtggtcaagaccctgctggactttggctgccatcccagcctccag
gactcggagggtgacacgcccctacatgatgccatcagtaagaagagagacgacatgctg
tctgtgctgctggaggcgggagcagatgtcaccatcaccaacaacaacggtttcaacgcc
ctgcaccacgctgccctccgagggaaccccagtgccatgcgtgtgttgctgtccaagctg
ccgcggccctggattgttgacgagaagaaggacgatggttacaccgccctgcatctggcc
gcactcaacaaccacgtagaggtggccgagttgctggtgcaccagggcagtgccagcctg
gacatccagaacgtaaaccagcagacggccctgcacctggccgtggagagacagcacaca
cagatagtcaggctactggtgcgagcggaggccaagctggacgtgcaggacaaggacggg
gacactcctctccacgaggcgctgcgtcaccacacactgtcccagctccgccagctgcag
gacatgcaggacgtcagcaaggtggagccctgggaaccatccaaaaacacgctgatcatg
ggtctgggcacccagggagcagagaagaagagtgcagcgtccatcgcctgcttcctcgcg
gctaacggagcagaccttaccatccgcaacaagaagggccagtctcctctggacctctgc
cccgaccccagcctctgtaaggccctggccaagtgccacaaggaaaagaccagtggccag
gtgggttctcgcagcccgtctctgaacagtaacagtgagaccctggaggagtgtatggtg
tgttctgacatgaagagagacaccctgttcggaccctgtggacacatcgccacctgctct
ctctgctccccacgcgtcaagaagtgtctcatctgcaaggaccaggtccagtccagaacc
aagatcgaggagtgtgtcgtgtgttctgacaagaaggctgccgtgctcttcgagccctgc
ggtcacatgtgcgcttgtgagaactgtgccagcctcatgaagaagtgcgtacaatgccgg
gctgttgtggaacgccgcacgcccttcgtcctgtgttgtggagggaaaggtatggaggat
gatgcagctgatgatgatgatgatgatgaggatgatgaggaccttacaggtagctctaac
tcagctctaatggcaggggggtcgcagcaggatctgctccagcccaacaatctggcgcta
agttggtccagcggtaacatcccggccatgcagagagacaaagacaacaccaatgtcaac
gctgacgttcagaagctgcagcaacaactgcaggacatcaaggagcagaccatgtgtcca
gtgtgtctggaccggctgaagaacatgatcttcatgtgtggccacggcacctgccagctg
tgtggtgaccgcatgagcgagtgccccatctgccgcaaggccatcgaaagacgcatcctc
ctctactag
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