Coregonus clupeaformis (lake whitefish): 121581066
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Entry
121581066 CDS
T08357
Name
(RefSeq) GATA-binding factor 6-B-like
KO
K17897
GATA-binding protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121581066
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121581066
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
121581066
NCBI-ProteinID:
XP_041752364
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Position
14:complement(27829451..27836681)
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AA seq
514 aa
AA seq
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MDLGENSWSMVKQEVSSSPGSPAEQSYLHGGQDRRDSHGRAHDSEGLRSPPPTDQLDLVG
HRRAEGPGRSSLHSYVHFGHGHHNNNNTALPTTEDITLFTDLDQGNKLIISSGAHPHHKG
GLIVDPSDMYQTLAIAAAHQSQAGYDSPSGGYMHSNPNSPVYVPSSRVGPMISSLPYLQA
SGSSQPSHAVTSHSVWSQSTPESPSYSTGSPHTSNRFHYPPSPPMNNGAPRDNVYSNPLN
VGSRDQYGLPRPLSGSYASPYSPYVGPQLSQLSSPWPGGPFDNTMLHTLQSRGAPLTIRG
PNGDILDDLGESRECVNCGSISTPLWRRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRMS
SSRRIGLSCANCQTSTTTLWRRNAEGEPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKP
KTLNKTKGSSGNSNSVAMTPTSTSSSNSEDCSKNSSPNTQVQSSVLSGPVEGSGGSAIVK
YPGQDGLYTSVGLTQSSDIAGSVRGEPWCPMALA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggcgaaaacagctggtccatggtcaagcaagaagtgtccagcagcccaggg
tcaccggctgaacagagctacttacacggcggtcaggacaggagggacagtcacggccgc
gcgcacgactcggagggactcaggtcaccgccgccaaccgatcaacttgacttagtggga
caccggcgcgccgaggggccaggcagatcatctctacactcctatgttcacttcggacac
ggacaccataacaacaacaacactgccctgcccaccaccgaggatatcacgctgttcacg
gatttagaccagggcaacaaactaatcatctctagtggagcgcacccacaccacaagggg
ggccttatagtcgaccccagcgacatgtatcaaacactagccatcgcggcggcccaccag
agccaggcggggtacgactcgccctctgggggttatatgcactccaaccccaactctcca
gtgtatgtaccgagctcccgggtgggacccatgatatccagcctcccttatttgcaagcc
agcgggtcgtctcagcccagccatgcggtcaccagccattcagtctggtcgcagtctact
ccggagagtccctcctacagcaccgggagtcctcatacctccaaccgtttccactaccct
ccaagcccgccaatgaacaacggagcgcccagggataacgtctacagtaacccgctgaat
gtgggcagccgagaccagtacggcctcccacggcccctcagtggatcctacgccagtccc
tactccccgtatgttggaccgcagctatcccagttgtcctcgccttggccgggaggaccg
ttcgataacaccatgctgcacactttgcaaagcagaggtgcgcccttgacgattcgagga
cccaatggagatattctcgacgacctcggagagagcagggaatgcgtcaactgcggctcc
atctccacgccgctttggagacgcgatggcacgggccactttctctgcaacgcttgcggc
ctgtacagcaaaatgaatggactcagccggccattaattaaaccacagaagcggatgtca
tcatcccggcgaatcggcctctcctgcgccaactgtcagacgagcacaaccaccttgtgg
cgcagaaacgcagagggagaaccggtctgcaacgcatgtgggctctacacaaaattacat
ggagtacctcggccgctcgccatgaagaaagagggaattcagacgaggaaaagaaaacct
aaaactttgaacaaaaccaagggatcctctggaaatagtaattcagtcgccatgactccg
acgtcgacatcttcttccaactctgaagactgctcgaagaacagctctccaaacacgcag
gtccagtcctctgtcctgagtggcccagtggagggctcaggcggctctgccatcgtgaag
tacccaggccaggatggtctctacacaagtgtgggcctcacccagtcttcagatatagcc
ggctccgtcaggggagagccctggtgccccatggctcttgcctga
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