Coregonus clupeaformis (lake whitefish): 121581072
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Entry
121581072 CDS
T08357
Symbol
ssx2ipa
Name
(RefSeq) synovial sarcoma, X breakpoint 2 interacting protein a isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121581072 (ssx2ipa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121581072 (ssx2ipa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121581072 (ssx2ipa)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121581072 (ssx2ipa)
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Paralog
GFIT
Motif
Pfam:
ADIP
FAD-depend_C
Motif
Other DBs
NCBI-GeneID:
121581072
NCBI-ProteinID:
XP_041752374
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Position
14:27404738..27413511
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AA seq
577 aa
AA seq
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MGDWWTTATIEPSIENHEISSISRMTMSPSKHHNNLPTMHSSTMTLSKSSYNVLSAFCTE
ENVPQCTSYINQEMESLGFSSACIESSSPEGSGGLNTVPALNVMYELLQMHHRSQRSLQE
QETEQLKCSSALEHLQITNSRLKDQLELYKREKSILHEAERQLQLKNKTLQNCLKTEKDE
VQKLQSIIASRASQYSHDAKRKERESAKLKERLNQLLVDKRDKKLAIDVLNYLGRADGKR
SQWKTGKVEARHEGEMYKSLLSDYEGRQRALMLENAELKKVLQQMKREMVSILSPSPRKS
CSSSRGDRVEDSLERASPDREEEVGDCSRETLDQSCDHARDQSCEHAREKLTNSIRQQWR
RLKSHMERLDSQASLVQQSQQCAGKELVPRQIQEEEMERMRLEVQQCKDFIQTQQQLLQQ
QLNSPCYDDETAALLNDCYTLEEKERLKEEWRLFDEQRRNFERERKNFTDAAIRLGHEKR
AFEEDRASWLKNQFLNMTPFVDRKRHSTSETPRALSISSEPEMNIPSTPAMLTKSRTHTA
FSTPKSASDAGMPSTADLYRTLCLIPDRSSSSVGSSK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgggagactggtggacgacagcaaccatagagccatcaatagaaaaccatgagatctcc
agcatatcaagaatgacgatgtccccctcgaagcatcataacaaccttcctacaatgcac
tcctccaccatgacactgtccaagagttcttacaatgtgttaagtgccttctgcactgag
gagaatgttccccagtgtacctcatacatcaatcaggagatggagtctctggggttctcc
tctgcctgtattgagtccagttcaccagagggaagcggggggctgaacacggtgccagcc
ctgaacgtcatgtatgagctgctccagatgcaccaccgaagccagcgcagcctgcaggag
caggagaccgagcagctgaagtgctccagcgccctggaacacctgcagattaccaactcc
agactcaaggatcagctggagctctacaaaagagagaagtcaatactgcacgaggcagaa
aggcagctgcaactcaaaaacaagactctgcagaactgcctgaaaacagaaaaagatgag
gtgcagaagctccagagcatcatcgccagcagagcctctcagtacagccatgacgccaag
aggaaggagagggagagcgccaagctcaaagaacgcctcaaccagctactggtggacaag
agggataagaaactagcgattgatgtattgaactacttgggacgggctgatgggaagaga
agccaatggaagactggaaaggtggaggccagacatgagggggagatgtacaagtccctg
ctgagtgactacgagggtcgtcagagggccctgatgctggagaacgctgagctaaagaag
gtgctgcagcagatgaagagggagatggtgtccattctgagtcctagtcctaggaaatcc
tgctccagctccagaggagaccgtgtggaagacagcctggaacgggccagcccagacagg
gaggaggaggttggtgactgcagtagggagaccctggatcagtcatgtgatcatgctagg
gaccagtcctgtgagcacgcccgggagaagctgaccaatagcatccgacagcagtggagg
agactaaagagccacatggagagactggacagccaggcctccctggtgcagcagagccag
cagtgtgctggtaaagagctggtccccagacagatccaagaggaggagatggagaggatg
agactggaggtccagcagtgtaaagactttatccagacccaacagcaactcctacagcag
cagctcaactctccctgctatgatgacgagactgccgctctgctgaatgactgctacact
ctggaggagaaggagcgtcttaaagaggagtggaggctctttgacgagcagaggaggaac
tttgagagggagagaaagaactttactgacgctgccattcgcctcggtcatgagaaaagg
gcttttgaggaagaccgtgcctcgtggctcaagaatcagttcttgaacatgactccgttc
gtggaccgtaaaagacattccacgtcagaaactcctcgtgccttatcaatcagtagtgaa
ccagagatgaatatcccctccacccctgccatgctgaccaaatcccggacgcacactgcg
ttctcgactcctaaatctgcatctgacgctggcatgccctccacagctgatctctaccgc
acattatgcctcataccagacaggagctcctcttccgtaggcagttcaaaatga
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