Coregonus clupeaformis (lake whitefish): 121581124
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Entry
121581124 CDS
T08357
Name
(RefSeq) AP-1 complex subunit gamma-1 isoform X2
KO
K12391
AP-1 complex subunit gamma-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121581124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121581124
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Others
AP-1 complex
121581124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
DUF11
Peptidase_M73
Motif
Other DBs
NCBI-GeneID:
121581124
NCBI-ProteinID:
XP_041752452
LinkDB
All DBs
Position
14:13908256..13919844
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AA seq
762 aa
AA seq
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MSPSVRLQEMIRVIRGARTQGEERGVIQRECAAIRAQFRQADNGTRSHNLAKLLYVHMLG
YPAHFGQMECVRLIASPRYNEKRVGYLGAMMLLDEKQDASLLITNSIKNDLSHSSQYVQS
LALCTLGCMGSAEMCRDLAPEIDRLLRASNSYIKKKAALCAVHIVRKVPELGELFTPAAQ
SLLSEKNHGVLHGAVVLITELCERNPDTLEQFRKVVPELVQIMKGLVMSGYSPEHNVAGI
SDPFLQVRILRLLRILGRNNDTASDAMNDLLAQVATNTDSSKTAGSAVLYETVLTVMDIK
SESGLRVLAVNILGRFLLNNDRNIRYISMTSLQKIVQTDHNAVQRHRGTIVDCLKDQDAS
VKRCPPELRAHTTSGIFNAAERYAPSQRWHIDTILHVLTTAGGDVRDETVPNLIQLITTA
TELHCYTVHKLYRALITDISVQSLVQVACWCIGEYGDLLLRGECEETEPVQVAEDDVLDA
LEMVLQSHMSSPATRGFALTATMKLSTRITHNVDRIRSIVSIYGSCIDVELQQRAVEYNA
LFKKYDHMRAAVLERMPVIDKSSPGHTNGESAGGTMKEMEPTKLTQEVVLPQEPANKVCD
LLDLLGGSAEPLQPSPALSTTPLGPVSSTAGGDLLDLLGGLDVTPVPPSVIVYEKNGVTL
KLQTDRQTDTGMTVTLTATNSTDGDITSITLQAAVPKSVQLQMKAPSGDIIPAHGLGQVT
QTVLLNNPNKVSLKMRVRVCYTSQGSVCQDTVQIDSFPSPAW
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtctgtgcgtctgcaggagatgatcagggtgatcagaggagcccgtacacag
ggagaggagcgtggtgtgatccagagggagtgtgcagccatccgggcgcagttcagacag
gctgacaatgggacgcgctctcacaacctggcaaagctgctgtatgtgcacatgctgggt
taccccgcccacttcggtcagatggagtgtgtgcgtctgattgccagccctcggtacaat
gagaagcgtgttgggtacctgggtgccatgatgcttctagacgagaagcaggatgctagc
cttctcatcacaaactccatcaagaatgacctgtcgcacagcagtcagtatgtccagtct
ctggctctgtgtactctgggctgtatgggctcagctgagatgtgtcgagacctggcccca
gagatcgaccgcctcctcagagcctccaactcctacatcaaaaagaaggcagctctttgt
gcggtgcacatcgtgaggaaagtaccagaactaggagagctgttcacccctgcagctcaa
tccctgctctctgaaaagaaccacggggtgttacatggagctgtggttctgattactgag
ctgtgtgagcgcaacccagacacactagagcagtttcgtaaggtggtgccggagctggtc
cagataatgaaaggcctggtgatgtcaggttactctccagaacacaacgtggctgggatc
agtgaccccttcctgcaggtgcgcattcttaggttgctgaggatccttggtcgtaataat
gatacagccagtgatgccatgaatgacctgctggcccaggtggccacgaacacagacagc
agtaagactgcaggcagtgctgtgttgtatgaaacggttctcactgtcatggacatcaaa
tcagaaagtggcttgagggtcctagctgtgaatatcctggggcgatttcttctgaacaac
gataggaacatccggtacatctccatgacttcccttcagaagattgttcagacagaccac
aatgcagtgcagcgtcacagggggaccatagtggactgcctgaaggaccaggatgcttct
gtcaaacgctgtcccccagagctccgagcacacaccacctcaggcatcttcaacgctgca
gagaggtatgctccctctcagcgctggcacattgacaccatcctgcatgtcctcaccacg
gcagggggcgacgtgagggatgagacagttcccaacctgatccagctcatcaccacagca
acagaactacactgctacacggtccacaagctgtacagagccctgattacagacatctca
gtgcaatccctggtacaggtggcatgctggtgtattggggaatatggagacctgcttctg
agaggagagtgtgaggagacagaacctgttcaggtggcagaggatgatgtcctggacgcc
ttggaaatggttctacagtcacatatgtcgtcgccggcaaccaggggctttgcgctcaca
gcaaccatgaaactcagcacacgcataacacataacgtggatcgcattaggagcatcgtc
agcatctacggcagctgcatcgacgtggaactccagcagagggcagtggaatataacgct
ctgtttaagaaatacgaccacatgagggctgctgttctggagagaatgccagtgattgac
aagagctcaccgggacataccaatggagaatcagcaggggggactatgaaagagatggag
ccaaccaaactgacacaggaagtagtattgccccaggaacctgctaacaaggtgtgtgat
ctgttggacctgctaggtggttctgcggagcctctccagcccagcccagccctgtccacc
acaccgctcggccctgttagcagcacggctgggggagacctactggacctgctgggaggc
ctggatgtcacacctgtgccacctagtgttatagtgtatgagaagaacggtgtgactctg
aaactacagactgacagacagacagacacagggatgactgttaccctcactgccaccaac
tctactgacggggacatcaccagcatcaccctgcaagcagcagtacccaagagcgtccag
ttacagatgaaggctccgagtggtgacatcatcccggcacatggcttaggtcaggtgacc
cagactgtgctcctcaacaaccctaacaaggtgagtctgaaaatgagggtgcgtgtgtgc
tacaccagccagggctctgtctgccaggacacggtgcagatcgactcatttcccagcccc
gcctggtaa
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