Coregonus clupeaformis (lake whitefish): 121581141
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Entry
121581141 CDS
T08357
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121581141
03036 Chromosome and associated proteins [BR:
cclu03036
]
121581141
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121581141
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121581141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-met
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2HE
zf-C2H2_15
LIM
C1_1
BNIP2
zf-C2H2_ZN142
zf-WIZ
Zn_ribbon_DUF2089
DUF7128
DUF6318
Motif
Other DBs
NCBI-GeneID:
121581141
NCBI-ProteinID:
XP_045080638
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All DBs
Position
14:14311392..14314108
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AA seq
594 aa
AA seq
DB search
MRRYSVKMHCEPQTEDPQWTTDPDYQPPAKKTAKKAKKSKLRYNTEGDKDNMDVSVYDFE
EEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHT
DERPHKCHLCGRAFRTATLLRNHLNTHTGTRPHKCQDCDMAFVTSGELVRHRRYKHTHEK
PFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYEC
YICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIEQGRKC
RYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYCCRQERHMLMHRRTHTGEKPYSCSQCE
KTFRQKQLLDMHFRRYHDPNFVPTAFVCTKCGKTFTRRNTMARHAENCNGDPGEGENGTP
PKRGRGGRKRKMRSRKDDDDDDSEDNADPELDDIDEEDEEAEAALLEDEEEEEEEMELEQ
APPTKPIPAPVEPPVKRKRGRPPKNTPKPASPAKASKATPKGKAAAAAIIQVEDENTGAI
ENIIVKNEPEAEQAAIEVVVEQSEEAEAGVALPVAEVASNGDLTPEMIFSMMDR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgagaagatatagcgtcaaaatgcactgcgagccccagactgaagacccacaatggacc
acggacccagactaccagcccccagccaagaagactgccaagaaggcaaagaagagcaag
ctgcgctacaacacagagggggacaaagacaacatggatgtgtctgtctatgactttgag
gaggagcagcaggaggggatgctctctgaggtcaacgcggagaaggtggtgggcaacatg
aagccccccaaacccaccaagatcaagaagaagggtgtgaagaaaacattccagtgtgag
ctgtgtagctacacctgtccccgccgctccaacctggaccgacatatgaagagccatacg
gacgagaggccccacaagtgccatctgtgtggaagggccttcaggaccgctaccctgctg
aggaaccacctcaacacacacacaggtaccagaccacacaagtgtcaagattgtgacatg
gcctttgtgaccagcggagagctggtccgacatcgtcgctacaagcacactcatgagaaa
cccttcaagtgctccatgtgtgactatgccagtgtggaggtgagcaagctgaagcggcac
atccgttcccacaccggggagcgtccgttccagtgcagtctgtgcagctacgccagcaga
gacacctacaagctgaagagacacatgaggacacactcgggagagaagccatatgaatgc
tacatctgccacgcccgtttcacccagagtggaaccatgaagatgcacatcctgcagaag
cacacagagaacgtggccaagttccactgcccccactgtgacacagttatcgcccgcaag
agtgacctgggtgtccatctgcgtaagcagcactcgttcattgagcagggcaggaaatgc
cgttactgtgatgctgtgttccacgagcgctacgctctcatccagcaccagaagtcccac
aagaatgagaaacgcttcaagtgtgaccagtgtgactactgctgcagacaagagcgccac
atgctgatgcacaggcgcacgcacacaggagagaagccttactcctgtagccagtgcgag
aagaccttccgtcagaagcagctcctggacatgcacttccggcgctaccatgaccccaac
tttgtgccgactgcctttgtgtgcacaaagtgtggcaagaccttcacccgcaggaacacc
atggccagacatgcagagaactgtaacggggatcctggtgaaggagagaatggaacccca
cccaagagaggacgaggtgggaggaagaggaagatgcgctcaaggaaggacgatgatgac
gacgacagtgaggacaatgctgatcctgagctggatgacattgatgaagaggatgaggag
gctgaggcggcactgctggaggatgaagaagaggaggaggaggagatggagttggagcag
gctccacccaccaagcctatccctgcccctgtggagcctcccgtgaagaggaaacgcggt
agaccccccaagaatacgcccaaacccgcctcacctgccaaagctagcaaggctacccct
aagggcaaggctgctgcagcagccatcatccaggtggaggatgagaatacaggtgccata
gagaacatcatagtgaagaatgagccagaggctgagcaggctgccatagaggtggtggtt
gagcagtcagaggaggcagaggcaggggtagcgctgcctgtagcagaggttgcgtccaac
ggagatctcacccctgagatgatcttcagcatgatggaccggtga
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