Coregonus clupeaformis (lake whitefish): 121581183
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Entry
121581183 CDS
T08357
Name
(RefSeq) protein fem-1 homolog A
KO
K25805
protein fem-1 homolog A/C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121581183
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
121581183
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_12
TPR_NPHP3
TPR_10
TPR_2
DUF2729
Motif
Other DBs
NCBI-GeneID:
121581183
NCBI-ProteinID:
XP_041752558
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All DBs
Position
14:16011720..16015699
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AA seq
617 aa
AA seq
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MDITTAVFNAARDGKLKLIQKLLSNKSPEELQALAEEKTQGGTPLLIASRYGHLEVVDYL
LEHCKAKVELGGSVNFDGETIEGAPPLWAASAAGHLPVVSTLLKHGASVNNTTLTNSTPL
RAACFDGHLEIVRYLVENRADMEVANRHGHTCLMISCYKGHKEIAKFLLERGADVNRKSV
KGNTALHDCAESGSLDIMKMLLKCNARMERDGYGMTPLLAASVTGHTNIVEYLAHQPRSS
REERVDALELLGATFVDKKRDLLGAMRYWRRAMELRQPADKVGLLAKPPPGPPVPAYDCA
REVSTAEELEALITDPDEMRMQALLVRERILGPSHPDTSYYIRYRGAVYADSGNFERCIS
LWKYALDMQQSNLDPLSPMTASSFLSFAELFSFVLQDRAKGTLATRVTFHDLMGVLGKSV
REVERAVAQRDSPPEAPQFTKALSIILHLVFLLEKLECTAEQEHQKKQTVYRLLKLNPRA
RSGFTPLHMAVDKDTTSVGRYPVGRFPSQTVASLLLECGADVDSRDCDNNTPLHIAASNG
CPEIMALLVRAGAHFDATNAQRKTAYELLDEQSSGHPALYPLNYVTLQCLAARAIERHRL
PYKGLISEEMETFIELH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatatcacgacggcggttttcaacgcggccagagatggtaagctgaaacttatccag
aagttgctgagcaacaaaagtcccgaggagttgcaagctctcgccgaggagaaaacgcag
ggaggcacccctctcctcattgcctctcgatacggacacttggaggttgtggactatttg
cttgaacactgtaaagctaaggtggaactaggaggctcggtgaactttgacggcgagacg
attgaaggggctcccccgctatgggcggcttcagcggctggtcacctccctgtagtcagc
acactcctcaaacacggtgcctctgtcaacaacactacgctgaccaactcaacgcccctc
cgtgctgcctgcttcgatggtcacctggagattgtccgctacctggtggagaaccgagcc
gatatggaggtagccaaccgccacggccacacctgcctgatgatctcgtgctacaagggc
cacaaagagatcgcaaagttcctcctggagcgtggtgccgatgtcaaccgtaagagtgtg
aaaggcaacactgctctccacgactgcgccgagtccggtagcctggacatcatgaagatg
ctgctgaaatgtaatgcccgcatggagagggacggctatggcatgacccctctcctagcc
gccagcgtcacggggcacaccaacatcgtggagtatctcgcccaccagccccgctcttca
cgagaagaacgtgttgatgcactcgaactcctgggggccaccttcgtggataagaagaga
gacctcctgggggccatgagatactggaggagagccatggagctgagacaaccagctgac
aaggtgggactcctggccaagccccctccggggccccctgtccctgcctacgactgtgcc
cgagaggtgagcacagccgaggagctggaggctctgatcacagaccctgacgagatgcga
atgcaggccctgctggtccgtgagagaatcctggggccctcgcaccctgacacctcctac
tacatccgctacagaggggccgtctacgccgactctggcaactttgagcgctgcatcagc
ctgtggaagtacgccctggacatgcagcagagtaacctggaccccctcagccccatgaca
gccagcagcttcctgtccttcgctgagctcttctcctttgtgctgcaggaccgggccaaa
ggtaccctggcaactcgcgtcaccttccacgacctgatgggggtgttggggaagagcgtg
agggaggtggagagggcggtggcccagagggacagcccccctgaagccccccagttcacg
aaggccctgtccatcatcctccaccttgtgttcctgctggagaagctggagtgcactgcg
gagcaggagcaccagaagaagcagacagtgtaccgcctcctgaagttgaacccgcgggca
cggagtggcttcacccccctgcatatggccgtggacaaggataccacgtcggtgggccgc
taccccgtgggtcgcttcccctcccagaccgtggcctcgctgctgctggagtgcggagcg
gacgtggactcacgggactgcgacaacaacacgcccctgcatatcgccgccagcaacggt
tgcccggagatcatggcgctgctggtgagggcaggggcacacttcgatgccaccaatgcc
cagaggaagacggcgtacgagctgctggacgagcagagcagcgggcacccggccctctac
cccctcaactacgtcactctgcagtgcctggcggcgcgcgccattgagaggcacagactg
ccctacaagggcctcatctcagaggagatggagaccttcattgagctgcactga
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