Coregonus clupeaformis (lake whitefish): 121581184
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Entry
121581184 CDS
T08357
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121581184
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121581184
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121581184
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121581184
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121581184
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Type II RPTP family
121581184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_2
ig
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Tc-R-P
PTP-SAK
DSPc
Fn3_PTPRU
fn3_2
Y_phosphatase3
V-set
Tissue_fac
PTPlike_phytase
Ig_VEGFR-1-like_5th
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
121581184
NCBI-ProteinID:
XP_041752559
LinkDB
All DBs
Position
14:16026929..16111618
Genome browser
AA seq
1528 aa
AA seq
DB search
MVPPRPGGTVAKSRVPRPGYGLCLYHPCLLLLLVLNFLPNLSEALAAPKFTKIPGDQIGV
SGGVASFVCQASGDPKPMVNWNKKGKKVNSQRIETIEFDDGAGAVLRIQPLRAPRDENVY
ECVARNREGEVATTAKLAIIREDLLPFGFPSIDMGPQLKVVERTRTATMLCAASGIPDPE
ISWFKDFLPVEPRSSLGRIKQLRSGALQIENSEETDQGKYECVATNSQGVRYSSPANLYV
RELREGSTDKLRRVPPRFSILPSNHEIMPGGSVNITCVAVGSPMPYVKWMLGIEDLTPED
EMPVGRNVLELNGVRESANYTCVAMSSLGIIEATAQVSVKTLPKPPGTPIVTETTATSVT
ITWDSGNPDPVSYYIIQYRAKAPDSKYEAVDGITTTRYSIGGLYPNTDYEVRVSAFNSIG
QGPSSTRVEARTGEQAPASPPRNVQSRIISQNTVMVRWEEPEEPNGQVKGYRVYYTMDPS
QPMSLWQIHNVQDSTITTIQSLVPSETYTVRVLAFTSVGDGPFSDSVHVKVLPGVPGQPG
KFKVGKVTDTSIQLTWEPSYTKEGIVNYELLYKPVKFGSLEKLTFGPRASYTVEGLRANT
EYSFSLAAISNKGIGAFTNELVQRTSQANVPRNFSVNLATKTSVLLTWEFPDSPYPYHFT
VEYNHQKMEVDARLRKAVIPNLQPDTDYDFKITSPEGNMGRLRHRILAKTSPLIGIRRPE
IDHSRDTETTITIILPSLENRSPVKNVYVVVVPLRRARGVIRHLKNPDEMDLEELLDISQ
RQRDSRQQKQVDLRRAYITARFTPATLPAFFTLGDQLDYGGFENRALEPGQEYVFFILAE
LNGTTGKMYGASPYTDPVIAPDSDPQPLDAGDGLIWVVGPVLAVVFIICIVIAILLYKNS
KPDSKRKDSEPGTKSLLGNAEMMAHHPTDPVEMRRINFQTPGMMSHPPIPITELAEHTDL
LKANDNLRLSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHTRVILAPIEGSSPG
ILGSDYINANYIDGYRKQNAYIATQGPLAETFGDFWRMVWEQRAASVVMMTRLEEKSRVK
CDQYWPTRGSETYGMIQVTLLDTMELATFCVRTFSLHKSGSSERREVRQFQFTAWPDHGV
PEYPTPFLAFLRRVKACNPPDAGPVIAHCSAGVGRTGCFIVIDAMLERIRHERTADVYGH
VTLMRSQRNYMVQTEDQYGFIHEALLEAVACGNTEVAARSLFSYMQKLGQVENGEHVTGM
ELEFKRLANTKAHTSRFVSANLPCNKFKNRLVNIMPYETTRVCLQPIRGLEGSDYINASY
IDGYRQQRGYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSA
RYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFI
GQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGAVDIFQTVKMLRTQRP
AMVQTEDEYQFSYQAALEYLGSFDHYAT
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggttccccccaggcctggtggaactgtagccaagtccagggtgcctcgccctgggtac
ggcctctgcctctaccacccttgtcttctgctgctgctggtgctcaacttcctgcccaac
ctctctgaggccttagcggcgcccaagtttaccaagattcccggggaccagattggggtc
tcgggaggtgtggcctcgttcgtgtgccaggcgtcaggtgaccccaagcccatggtcaac
tggaacaagaagggcaagaaggtcaactcccaacgcatagagacgatagagtttgatgat
ggagcgggggccgtgctaaggatccagcctctcagggcccccagagatgagaacgtctat
gagtgtgtggcccgcaacagagaaggagaggtggccaccaccgccaagctggcaatcata
cgagaggacctgttgccatttggtttccccagcatcgacatgggaccccagctgaaggtg
gtggagaggaccaggactgccaccatgctgtgtgctgccagcggcatcccagacccagag
atctcctggttcaaagacttcctgcctgtagaacccaggtccagcctgggacgcatcaaa
caactacgctcaggtgccctgcagatagagaacagtgaagagaccgaccaggggaagtat
gagtgtgtggccactaactctcagggcgtacgctactcttccccagccaacctgtatgtg
cgagagctacgagaaggatcaacagacaaattgcgtcgtgtgccccctcgtttctccatc
ctgccctccaaccatgagatcatgcctggcggcagcgtcaacatcacctgtgtggcggtg
ggctcgcccatgccctacgtcaaatggatgctgggtattgaggacctgaccccggaagac
gagatgccggtgggacgcaatgtgctggagctcaacggagtgagggagtcggccaactac
acttgcgtggccatgagcagtctggggattatagaggccaccgcacaggtgtcagtcaag
actcttcccaagcctcccggtacccccatcgtcacagagacgaccgctaccagcgttacc
atcacctgggactccggtaaccccgacccggtgtcctattacatcatccagtaccgggcc
aaggcaccagacagcaagtatgaggcggtggacggtatcaccaccaccaggtacagcatc
ggagggctctaccccaacacagattacgaggtcagggtgtcggccttcaacagcatcggc
cagggcccctcgtccacccgggtagaggccaggacaggggaacaggccccagctagcccc
cccaggaacgtccagtctaggatcatctcccagaacactgtcatggtccgctgggaagaa
ccggaggagcccaacggacaggtgaaaggttaccgggtgtactacaccatggacccatct
cagcccatgagtctgtggcagatccataacgtccaggatagcaccatcaccaccatccag
agcctggtaccctctgagacatacaccgttagagtactggccttcacctctgtgggagac
ggacccttctctgactccgtccatgtcaaagtgctgcccggagttccagggcagccaggg
aagttcaaagtggggaaagtgacagacaccagtatacagctcacctgggaaccttcctac
accaaggagggcattgtcaactacgaactgctctacaaacctgtcaagtttggcagcctg
gagaagttgacgttcgggcccagggcatcgtacacagtggagggcctgagggctaataca
gagtactccttctccctggcggccatttctaacaaaggcatcggagcctttaccaacgag
ctggtccagaggacatcacaagccaatgtcccgaggaacttctcagtgaacctggcgacc
aagacgagtgttctgctgacctgggagttccctgacagcccctacccataccactttact
gtggagtataatcatcagaagatggaggtggatgccaggctgaggaaagcagtgatcccc
aacctgcaacctgatactgactatgacttcaagatcacctcccccgagggcaacatgggc
cggctgaggcaccgcatcctagccaagacgtctccactaatcggcattcgtcgtccggag
atagaccacagccgtgacacggagaccaccatcaccatcattctgccctcactggagaac
cgcagccctgtcaagaatgtgtatgtggtggtagttcctctgaggagggcgaggggggtc
atcaggcatcttaagaacccagacgagatggacctggaggagttgttggacatcagtcaa
agacagagggactctagacagcaaaaacaggtggacctgcgtcgcgcctacatcactgcc
cgcttcacccctgctaccctgccagccttctttactctgggggaccagctggactacgga
ggctttgagaatcgcgctctagaaccgggacaggagtacgtgttcttcatcttggctgaa
ctcaatggcaccacagggaagatgtacggggccagtccctacacagacccagtgatagcc
cccgactcagacccccagcccctggacgcgggggacggtttgatctgggtggtgggacct
gtcctggccgtggtcttcatcatctgcatcgtcatcgccatcctgctctacaagaacagc
aagccagacagtaagaggaaggactctgagccaggcaccaagagccttctgggtaacgct
gagatgatggcccaccaccccacagaccccgtcgagatgagacgcatcaacttccagacc
cctggtatgatgagccaccctcccatccccatcacagagctggctgaacacacagatctg
ctcaaggccaacgacaacctgcgtctgtctcaggagtacgagtccattgaccctggtcag
cagtttacctgggagcactccaacctggaggtgaacaagcccaagaaccgctatgctaac
gtaatcgcctacgaccacacccgtgtcatcctcgctcccatagagggttcaagtccaggc
atcctgggtagtgactacatcaatgctaactacatcgacggctacaggaagcagaatgcc
tacattgccacacagggcccgctggcggagacgttcggggacttctggaggatggtgtgg
gaacagagggcagcctccgtggtcatgatgacacgcctggaggagaagtcccgggtaaag
tgtgaccagtactggccgacccgtggttcagagacctatgggatgatccaggtcacccta
ttggacactatggagctggccaccttctgtgtacgcaccttctccctgcacaagagtggt
agtagtgaaaggagggaggtgcgtcagttccagttcactgcctggccggaccacggagta
ccagagtaccccaccccgttccttgccttcctacgcagggttaaagcctgcaacccccct
gacgcaggtcctgtcatcgcacactgcagtgcgggggtgggccgcaccggctgcttcatc
gtgatcgacgccatgctggagagaatcagacacgagcgcacggccgacgtctacggtcac
gtgaccctgatgaggtcacagcggaactacatggtgcagacggaggaccagtacggcttc
atccacgaggcgctgctggaagcagtggcttgtgggaacacagaggtggcagccagaagc
ctgttctcctacatgcagaagctgggccaggtggagaatggagagcatgtcaccggcatg
gagctggagttcaagcgtctggccaacaccaaagcccacacgtctcggttcgtcagtgcc
aacctgccgtgtaacaagttcaagaaccgcctggtcaacatcatgccctacgagaccacc
cgtgtctgtctgcagccaatcagaggcctggagggctcagactacatcaacgccagctac
atcgatggatacaggcagcagagagggtacatcgccacccagggtccactggctgagacc
acagaagacttctggaggatgctgtgggaacacaactctaccatcgtcgtcatgctcact
aaactgagagagatgggacgggagaagtgccatcagtactggcctgcggagcggtcagcc
agataccagtactttgtagtggatcccatggctgagtacaacatgccccagtacatcctc
agagagttcaaagtcactgacgcaagggatggccaatcacggacagttcgtcagttccag
ttcactgattggccagagcagggagttccgaaatctggagagggcttcatcgacttcatt
ggccaggtgcacaaaaccaaggagcagtttggtcaggacggcccaatcagtgtccactgc
agtgcgggtgtagggcgtactggagtcttcatcacgctgagcattgttctggagaggatg
cgctacgagggagctgtggacatcttccagacagttaagatgctgaggacacaacgccct
gccatggtgcagacagaggatgagtaccagttctcctaccaggctgccctggagtacctg
gggagttttgaccactatgcaacctaa
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