KEGG   Coregonus clupeaformis (lake whitefish): 121581188
Entry
121581188         CDS       T08357                                 
Name
(RefSeq) nuclear receptor ROR-beta
  KO
K08533  RAR-related orphan receptor beta
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cclu03000]
    121581188
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:cclu03310]
    121581188
Transcription factors [BR:cclu03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    121581188
Nuclear receptors [BR:cclu03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   121581188
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 121581188
NCBI-ProteinID: XP_041752568
LinkDB
Position
14:16288457..16304310
AA seq 503 aa
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTSRN
RCQHCRLQKCLVLGMSRDAVKFGRMSKKQRDSLYAEVQKHKKNQECLNQGLSLSREDVAG
GESEWDGHGELSRSYSSGGSTSTLSDLDDIAALPELFDLPLTPQEAHEYCSLELQEDHGG
STGNTSNSSSSSSSSPISSNQNSPQQNLLDVTDANGIKHEYQMLSLTHTLLAHTHATLLE
PLPDDCPLMDIERITQSVVKSHLETSQYSSDDLKRLTYNGMQYSPEETRNFQCESAESVW
QQCAHHITNSIQYVVEFAKRITGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNATTNTMF
FDGKFASAQLFKALGCDDLVSAVFDLAKGLSRLQLTDEEMALFSAACLLSPDRPWLTDSQ
KVQKLQAKVYLALQHSLHMSGAADEKLDQMVSKLPMMKSICNLHIDKLEFFRLVHPETAY
SFPPLYREVFGSEISLPDSTNNS
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgagagctcaaatagaagtaataccctgcaagatctgtggggacaagtcctcaggaatc
cactatggagtcattacctgtgaaggctgcaaggggttcttccgccgcagccagcagaac
aatgccatgtactcgtgttcccgccagaggaactgtcttattgaccgaaccagccgcaac
cgctgccaacactgcagactgcagaagtgtctggtgttaggcatgagccgggacgccgtg
aagtttggccgtatgtctaagaagcagcgcgacagcctgtacgctgaggtccagaagcac
aagaagaaccaggagtgtctgaaccagggtctgtccctgtccagggaagacgtggctggg
ggagaaagcgagtgggacgggcacggggagctcagtcgctcctacagcagcgggggctcc
acctccaccctgagtgacctggatgacatcgcggcgctccccgaactgtttgatctgccc
ttgaccccacaggaggcccacgagtactgcagcctggagctgcaagaagaccacggcgga
agcactgggaacacctccaattcttcatcatcgtcatcatcctctcccatttcatccaat
cagaattctccccagcaaaatctactggatgtcaccgacgccaatgggatcaaacacgag
taccagatgttgtcactcacacacacgctcttggcgcacacacacgccacgctgctagag
ccactgcctgatgactgccctcttatggatatagagcgtatcacccagagtgtggtcaag
tctcacttggagacgagtcagtacagctctgatgacctgaagaggctgacatacaatggg
atgcagtactcacctgaggagacccgcaacttccagtgcgagtctgcagagtctgtgtgg
cagcaatgtgcccaccacatcaccaattccatccagtacgtggtggagtttgccaaacgc
attacaggcttcatggacctgtgtcagaatgaccagatcattctgctcaaagcaggctgt
ctggaggtgctgttgataaggatgtgcagggcgtttaacgccaccacaaacaccatgttc
tttgatggcaaatttgcctccgctcagctcttcaaagccctcggttgcgatgacctggtc
agtgccgtgtttgacctggctaaaggtctctcccgcctgcagctgaccgatgaggagatg
gctctgttcagcgccgcttgcctgctgtccccagaccgaccatggctaaccgacagccag
aaggtccagaagctacaggcgaaggtctacctggctctgcaacacagtctgcacatgagc
ggggctgctgacgagaaactagaccagatggtgtccaagctgccaatgatgaagtccatc
tgtaatctccacatcgacaagctggagttctttcgtctggtccaccccgagaccgcatac
agcttcccaccactctaccgggaagtgtttgggagtgagatctctctccccgactctaca
aacaactcctag

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