Coregonus clupeaformis (lake whitefish): 121581207
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Entry
121581207 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121581207
04121 Ubiquitin system [BR:
cclu04121
]
121581207
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121581207
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121581207
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121581207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
EHMT1-2_CRR
DZR
Motif
Other DBs
NCBI-GeneID:
121581207
NCBI-ProteinID:
XP_041752593
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All DBs
Position
14:complement(17222687..17225660)
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AA seq
317 aa
AA seq
DB search
MAEAPLRPCRFFCHQCSAEINPRLPISAFLQDFTCPQCESGFIEELSEERSTENESTSTA
STSDQNRPTFEIMDHQHMFTFPPGYGQFALGIFDENFDLRAGMPTEDNRETENRREREMA
SRQRYSARQPRGRHIPRRQGQRHEGVPTLEGIIQQLVNGIIAPTAMPNIGMGPWGMLHSN
PMDYAWGANGLDAIITQLLNQFENTGPPPADRERIKNLPTIQITEEHVGSSLECPVCKED
YSVGETVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMNFSPSSS
SSSSSNSSSNENAANNS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcccttacggccctgtcggtttttctgtcaccaatgttcagcagagatc
aaccctcgtctcccgatctctgccttcctgcaggacttcacctgtccacagtgtgaatct
ggcttcattgaagagctatcagaggaaagaagcactgaaaatgagtccacatccactgcc
tccaccagcgatcagaaccgtccgacttttgagattatggaccaccagcacatgtttaca
tttccgcccggatacggacaatttgctctggggatctttgacgagaatttcgacctccga
gcggggatgccgacggaagacaaccgcgagacggagaaccggcgggaacgggagatggcg
tcacggcaacggtacagtgcccggcaaccgcggggacgacacatcccacggcgacaggga
cagagacacgagggagtacccactttagagggaatcatccagcagctagtgaatggaatc
atagcacccacagccatgccgaacattgggatgggaccatggggcatgctacactcaaat
ccaatggactacgcttggggtgccaatggacttgatgctatcattacccagttattgaat
cagtttgagaacacgggtcctcctcctgctgacagagagaggataaagaacctgcccacc
atccagatcacagaggaacatgtgggttccagtttagaatgtcccgtgtgcaaagaagac
tacagtgtaggggagactgtcaggcaacttccgtgcaatcacctgtttcacaatgactgt
atagtaccatggctggaacagcacgacacatgtccagtgtgcagaaagagccttagtgga
cagaacacagctacggaccccccgggactatcaggaatgaacttctccccttcctcctcc
tcctcatcctcctccaactcctccagtaacgagaacgctgccaacaactcatag
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