KEGG   Coregonus clupeaformis (lake whitefish): 121581243
Entry
121581243         CDS       T08357                                 
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121581243
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121581243
Enzymes [BR:cclu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121581243
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121581243
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121581243
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_5 GlgE_dom_N_S
Other DBs
NCBI-GeneID: 121581243
NCBI-ProteinID: XP_041752667
LinkDB
Position
14:22891895..22923067
AA seq 1758 aa
MSDFAEFVPPPECPVFEPSWEDFSDPLGFINKIRPIAERTGICKIRPPEDWTPPFACDIR
NFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSRLRFPHVERKILDLYQLSKIVSS
EGGFETVCKEKRWSKVASRMSFPPGKGTGSLLRSHFERILYPYELFQSGATLTGIHRLYD
GEEQDEGMGEGGGEEEEEDEEDRERDSLSDGTPNKDCPLPERRSRRLKSEVGDERENKEP
KTLQIFGSGPKMVGLEIVPADDGFNKRQRHLKAQAFAFKMRPRKETLEVNFIPQIDLYMC
LMCGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFGFEQ
AVREYTLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSK
EVGSGFPVRDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLTHINVDISGMKVPWLYVGMC
FSSFCWHIEDHWSYSINFLHWGEPKTWYGVPAHAAEQLESVMKKLAPELFDSQPDLLHQL
VTIMNPNVLMEHGVPVFRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPMGR
QCVAHYRRLHRYCVFSHEELLCKMAADPESLDVELAAAVFREMGDMMEEETRLRQAVQEM
GVLSSEHEVFELVPDDERQCQKCKTTCFLSALTCPCSPERLVCLHHAKELCDCPMGNKCL
RYRYDLEEFPSMLYGVKSRAQSYDTWAKRVTEALAADHKNKKDLIELKVLLEDAEDRKYP
ENSLFRRLREMVKEAETCSSVAQLLLSRKQRHSTRQRPESSRTRNKLTVEELKVFVEQLF
KLPCVIGQARQVKELLENVEDFHERAQVALADELPDSSKLQALLDLGGGLDVELPELPRL
KQELQQARWLDEVRVTLAEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTVSER
WEDKARACLQARPRHSMLTLESIVIEARNIPAYLPNVLALREALHKAKEWSAKVDAIQVV
SRRTSGSNYAYLEQLESLLARGRSIPVRLDPLPQVESQVASARAWRERTARTFLKKNSTY
TLLQVLSPRVDIGIYGNSKSKRKRVKELLEKERGGLDLEVLSDLDESYEDACDPATVVAA
FKSKEQKEVEAIHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHGACV
PLPKTGSQKKLVGSAGWQSNSKEVKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGE
ALQCLTERAMGWQDRARQALATDELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAA
ANPDLQGHIQTFQQAGFSRAASPRQSVDYDDEETDSDEDIRETYGYDMKDPGEMKPYLFC
DEEIPVKSEEVVSHMWPTTPSFCAEHAYSSASKSCPQNQGTPRKQPRKTPLVPRSLEPPV
LELSPPAKAQLEELMMVGDLLEVSLDETQHIWRILEATHPPSEERFLQVMEHDDSQFEKP
MKIKMKDSEKKRKRKLERAEHQLLMAAVSGVGDMMRSPKSSKDQKRSLLDPLGKPKKKKL
KLNPDKNRELKQLAKRLAKEEKERKRKEKAVVKAEAVREGLEKRKEKKILDIPSKYDWSG
AEDSNDENAVCASKNCMRPCKDKVDWVQCDGGCDEWFHQVCVGVTCEMAENEDYICIDCT
RKSAILSGGVVGSVGRGMGIGGGGVTAVVKVERVCEEPVVLDAPVCSRLSQIIMPPSIMM
PPSISLPQLQQPDSQESS
NT seq 5277 nt   +upstreamnt  +downstreamnt
atgtctgattttgccgaatttgtaccccctcctgagtgcccagtttttgagccgagttgg
gaagatttttcggatccactaggatttataaacaagattcgacctattgcagagagaact
ggcatctgcaaaattcgaccgcccgaggactggacacctccttttgcctgcgacatacgc
aacttccgcttcactcccagagtccagagactcaatgaattggaggccctcactcgagtc
aagctcaacttcctggatcagattgccaagttctgggagctgcaggggtccaggctgcgc
ttccctcatgtggagaggaagatcctcgatctttaccaactcagcaagattgtctcctcc
gagggaggctttgagacagtgtgtaaggagaagagatggtccaaggtggccagcaggatg
agtttccccccagggaaaggtacgggctctctgctgcggtcccactttgagaggatcctc
tacccctatgagctcttccagtctggagccacgctcactggtatccaccgcctgtatgac
ggagaggagcaggacgagggcatgggggaaggaggaggggaagaggaggaggaggatgaa
gaggacagagagagggacagcctgagtgacgggactccgaacaaggactgcccgctccct
gagcgacgttcccgccgcctgaagtccgaggtcggtgatgagcgggaaaacaaagagccc
aagaccctgcagatctttggcagtggtcccaagatggttgggttagagattgtaccggct
gacgatgggttcaataagaggcagcgtcacctgaaggcccaggccttcgcctttaagatg
cgaccacgcaaagaaaccctggaggtcaactttatcccccagattgacctgtacatgtgc
ctgatgtgtgggcggggcgacgaggaggaccgcctcctgctgtgtgacggctgtgatgac
agctaccacaccttctgtctgattccgcccctacaggacgtccccaagggggactggcga
tgccccaagtgcgtcgctgaggagtgcagtaagccgcgagaggcatttggctttgagcaa
gccgtgagggagtacaccctccagagctttggagagatggccgaccacttcaagtcagac
tacttcaacatgcccgtgcacatggtgccgacagagctggtggagaaggagttctggcgt
ctggtgagctccatcgaggaggatgtcattgtggagtacggagctgacatcagctctaag
gaggtgggcagcggcttccccgtcagggatggcaagagacggctactgggagacgaagag
gagtatgccaactcaggctggaacctgaacaacatgccagtcctggagcagtcggtcctt
acccacataaacgtggatatctctggcatgaaggtgccctggctctacgtgggcatgtgc
ttctcctccttctgctggcacatcgaggaccactggagctactccatcaacttcctgcac
tggggggagcctaagacgtggtatggtgtcccggcccacgcggcagagcagctggagtca
gtgatgaagaagctggccccagagttgtttgactctcagcctgacctgctgcaccagctt
gtcaccatcatgaatcccaacgtcctaatggagcacggtgtgcccgttttccggaccaac
cagtgtgcaggggagtttgtggtgacctttcccagagcctaccacagtggcttcaaccag
ggatacaactttgctgaggctgtcaacttctgtaccgcagactggctcccgatgggtcgt
cagtgtgtggcccactaccggcggctccaccgctactgtgtcttctcccacgaggagttg
ctgtgcaagatggctgccgaccccgagagcctggacgtggagctggctgctgcagtcttc
agagagatgggagatatgatggaggaagagacacggctcagacaggccgtgcaggagatg
ggtgttctgtcctctgagcatgaggtgtttgagctggtccctgatgacgagcggcagtgt
cagaagtgtaagaccacctgtttcctgtcggctctgacgtgtccctgcagcccagagcgc
cttgtctgtctgcaccacgccaaggagctctgtgactgtcccatgggaaacaagtgtcta
cgctaccggtatgatctggaggagtttccctccatgctgtatggggtgaagtccagagcc
cagtcctatgacacctgggccaagcgggtcactgaggccttggctgctgaccacaagaac
aagaaagacctgatagagttgaaggttcttctggaggatgcagaggacaggaagtaccca
gagaacagtctgttccgtcggctcagagagatggtgaaggaggccgaaacttgctcctct
gtggcccagctactgctcagccgcaagcagaggcacagtaccaggcagcgtccagagagc
agcaggactcgtaacaagctgacagtggaggagctgaaagtcttcgtagagcagctgttc
aaactgccctgtgtcatcggacaggctcgacaggtcaaagagttactagagaatgtggag
gacttccatgagagagcccaggtagccctggctgacgagctgcctgactcctccaagctg
caggccctgctagacctgggtggaggtctggatgtggaactacctgagctgcccaggctc
aaacaggagctgcagcaggcccgctggctggatgaggtgcgtgtgacgctggcagagccc
caccgggtgaccctggagctgatgaagcggctgatagactctggggtggggctggcacca
caccatgctgtggagaaggccatggctgagttgcaggagatactcactgtgtcagagaga
tgggaggacaaggcccgcgcatgcctacaggccaggcctcggcacagcatgctaaccctg
gagagcatcgtgatagaggccaggaacatcccggcctacctgcccaacgtcctggccctc
cgagaggctctgcacaaggccaaggagtggagcgccaaggtggatgccattcaggtagtg
tcgcgtcgcacgagtggcagtaactatgcatacctggagcagttggagagcctgctggcg
aggggtcgctccatccccgtccggcttgaccccctgccccaggtcgaatcccaggtggcc
tcggcccgcgcctggagggagaggactgcacgtaccttcctcaagaagaactccacctac
accctgcttcaggtccttagtccgcgtgtggatattggtatctatggcaacagcaagagc
aaacgcaaacgagtcaaggagctccttgagaaggagagaggaggtctggacctggaggtt
ctcagcgacctggacgagagttacgaagacgcctgcgacccggccaccgtcgtagcggca
ttcaaatccaaggagcagaaagaggttgaggccatccactccctccgagccgccaacctg
gctaagatggccatggctgaccgtatcgaggaagtcaagttctgtctgtgtcgtaagacc
gccagtgggtttatgctgcagtgtgaactgtgcaaggactggttccacggagcctgcgtg
ccgttaccgaaaacaggctcccagaagaagctcgtgggctcggccggttggcagagcaac
agcaaggaggtcaagttcctgtgcccgttgtgccagcggtcacggcgcccgcgtctggag
accatcctgtctctcctggtgtccctccagaagctgccggtccgtctgcccgaaggggag
gccctacagtgcctgacggagagggccatgggctggcaggaccgcgccaggcaggccctg
gctacagacgagctgtcctcggccctggccaagctgtcggtgctcagtcagaggatggta
gaacaggctgcccgggagaagacagagaagattatcaatgctgagctgcagaaggctgcc
gcaaacccagacctgcagggtcacatccagacgttccagcaggcagggttcagcagggca
gcgtcgccacgtcagtctgtcgactacgatgacgaggagacggactcagacgaggacatc
cgggaaacatatggctacgacatgaaggacccaggtgagatgaagccgtacctgttttgt
gatgaggagatccctgtcaagtcagaggaagtagtcagtcacatgtggcccacaacaccc
tccttctgcgctgaacacgcttactcctctgcctccaagtcctgcccgcagaatcagggc
acccccaggaagcagcccagaaagaccccactggtgccccgctccctggagccccctgtg
ctggagctgtcccctccggccaaggcccagctggaggagctgatgatggtgggggacctg
ctggaggtgtccctggacgagacccagcacatctggaggattctggaggccacacaccct
ccctctgaggagaggttcctacaggtcatggagcatgacgattctcagtttgagaagccg
atgaagatcaagatgaaggactctgagaagaagaggaagaggaagctggagagggcggag
caccagcttctcatggcagccgtctccggggtcggagacatgatgcggtcccccaagtcc
tcaaaggatcagaaacggagcctcttagacccactggggaaacccaagaagaagaagctg
aagctgaacccggataagaaccgtgaactgaaacagctggccaagcgcctggctaaagag
gagaaggagaggaagaggaaggagaaagctgtggtcaaggctgaggctgtcagggagggg
ctggagaagaggaaagagaagaagatcctggatataccgtcgaaatacgactggtccgga
gctgaggactccaatgatgaaaacgcagtctgtgcatccaagaactgtatgagaccctgc
aaggacaaggtggactgggttcagtgcgacggcggctgtgacgagtggttccaccaagtg
tgtgtaggtgtgacctgcgagatggccgagaatgaggactacatctgcatcgactgcacc
cgcaagtcagccatcttgagtgggggcgtagttggaagtgtgggcagaggcatgggcata
ggaggcggaggggttacagcagtggtgaaggtggagcgtgtttgtgaggagccggtggtg
ctggacgcgccagtctgcagcaggctgagccagatcattatgcctccctccataatgatg
cccccctctatctccctcccccagctgcagcagccggattctcaggagagcagctag

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