Coregonus clupeaformis (lake whitefish): 121581258
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Entry
121581258 CDS
T08357
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 1-like isoform X1
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121581258
09133 Signaling molecules and interaction
04519 Cadherin signaling
121581258
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121581258
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121581258
04515 Cell adhesion molecules [BR:
cclu04515
]
121581258
Peptidases and inhibitors [BR:
cclu01002
]
Mixed peptidases
Family P2
121581258
G protein-coupled receptors [BR:
cclu04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
121581258
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121581258
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
7tm_2
Cadherin_CELSR2_9th
Laminin_G_2
GAIN
GPS
Ig_CLSTN
Laminin_G_1
Cadherin_FAT4_N
EGF
EGF_laminin
EGF_TEN
Dicty_CAR
hEGF
Fibulin_C
Frizzled
Motif
Other DBs
NCBI-GeneID:
121581258
NCBI-ProteinID:
XP_041752699
LinkDB
All DBs
Position
14:complement(25314781..25447947)
Genome browser
AA seq
3073 aa
AA seq
DB search
MELPMYWIWVCVLFNVPLLGCFELHLSETLQTGTVLANLSLGPGWIYKIDRTLTPKYIQN
FLQVEWQEGALRMYGKVDCVRLLRNPVPVYIRIGSLTSENFVLTHFNTFVHGQDCFIKYK
RKSTIGKPDIYINYLSKLEATSCLSAGHLLVNVTELLPAFTRNINFSASCTTGKDLRAVF
KHGNLLLDDDYCLGHGELSEVHLHCTLRALSDQRVRVSVSARLRLVTVVEGETHEQLTSS
HTIQIVPGKWNNRKRRNVNTPPQFQLPNYQVSVPENEPSGTRVITLKATDPDDGEAGRIE
YGMEALFDSRSNNFFVINLQTGAITTVQPLDREVKDTHVFKVMVTDNGSPRRSATSYLTV
TVSDTNDHGPVFEQTEYRVTIRENVEVGFEVMTIRATDGDAPSNANMVYKIVNSDGVNAG
FEIDSRHGLVRIRERPDRETMSQYQLIVEANDQGKDPEPRSATATVNISVEDENDNYPQF
SEKRYVVQIPENVAVNSKVTQVEATDKDEGNNAKVHYSIISGNVKGQFYIHSPTGVIDVI
NPLDYEMIREYNLRIKAQDGGRPPLINGTGMVVVQVVDVNDNAPMFVSTPFQATVLENVA
IGYSVIHIQAIDADSGDNARLEYCLTDTSPGFPFTINNSTGWITVAVELDRETTEFYTFG
MEARDCGIPVMSSSASVSITVLDVNDNIPTFTEKVYSLKINEDAVVGTSVLTVTAVDRDV
NSVVTYQISSGNTRNRFAITSQSGGGLITLALPLDYKQERQYILTVTASDGTRYDMAQVF
INVTDANTHRPVFQSANYQVMISEDRPVGSTVVVISATDEDTGENARITYIMEDNVPQFK
IDPDTGAITTQMEIDYEDQASYTLAIIARDNGIPQKSDTTYVEIIILDANDNTPQFQRDM
YQGTVFEDAPVYTSVLQISASDRDSGSNGRLSYTFQGGDDGEGDFFIEPYSGIIRTARKL
DRENVPVYTLKAFAVDKGIPPLKAAVDIQVSVLDINDNAPVFEKDELFIYVEENSPVSSV
VARISATDPDEGTNAQIMYQIVEGNIPEVFKLDIFKGDLTALTDLDYESRTEYVIVVQAT
SAPLVSRATVHIRLVDINDNDPVLQNFEIIFNNYVTNKSNSFPSGIIGKVPAHDPDVSDK
LHYSFESGNELNLLVLNADTGELKLSRDLDNNRPLEAPMTVSVSDGIHRVTALCTLRVTI
ITDDMLTNSITVRLENMSQERFLSPLLSLFLEGVAAVLSTSRQAVFVFNIQNDTDVRGAI
LNVTFSALQPGGPPGRYFPSEELQEQIYLNRTLLRLISSQQVLPFDDNICLREPCENYMK
CVSVLKFDSSPPFISSDTVLFRPIHPINGLRCRCPAGFTGDYCETEIDLCYSGPCRNNGK
CRSREGGYTCECQEDFTGEHCEVNARLGRCVPGVCKNGGKCVDLLVGGFMCQCPPGEYEK
PYCEMTTRSFPGQSFITFRGLRQRFHFTVSFMFATRERNALLLYNGRFNEKHDFIALEII
EEQIQLTFSAGEAKTVVHPFVPGGVSDGHWHSVQLHYYNRPNIGRLGIPHGPSAEKVAVV
AVDDCDIAMAVRFGNQIGNYSCAAQGTQTGQKKSLDLTGPLLLGGVPNLPEDFPVRNRDF
VGCMRNLSIDSKPTDMASFIANNGTTAGCPAKRNFCTKDLCQNGGVCVNKWNTYSCDCPL
GNGGKTCEQVMPSPQHFDGQALVSWSDLDVTIAVPWYMGLMFRTRQGTGTLMQANAGDFS
TVNLLISDQYVRFEVFLGSERVAVLSFPQVRVNDGEWHHVLVELKSVKDGKDIKYMALVS
LDYGLYKRSVEIGNELPGLRLRALYLGGLPGEGNHVHDGFTGCIQGVRMGETSTNVVNVN
MLQGFKIRVEEGCDLADPCDSNICPENSHCSDDWSTHTCVCDPGYFGRECVDACHLNPCE
HVSTCVRKPSSSHGYTCECGQNYYGQYCENKIEKPCARGWWGNPMCGPCNCDIGKGFNPD
CNKTSGECRCKDNYYRPKDEDTCYPCECFPLGAHSRTCDPHTGQCPCKAGVIGQQCNRCD
NPFAEVTATGCEVVYEGCPKAFDQGIWWPKTKFGRPAAMNCPKGSIGTAIRHCSDEKGWL
PPELFNCTTGSFSQLMKMNEELHRNESRMDGERSKAIVRLLHNATNHTDSYYGNDVKTAF
QLLTRVLQYESQQTGFDLTATRDAEFNENLVRAGSAILDPGTRDHWEQIQRSEGGTAHLL
RHFEDYTNTLAQNMRKTYLKPFTIVTDNMIIVVDYLDTSVPEQASFPRFHEIQEYYPKDL
TSSVHFPQFNTRPQEVPNKVVEPSPSVEPSQTDAPEEDHTLSNKRRRHVEPAAPLPVAVV
IVFRSLGQLLPERYDPDRRSLRLPNRPVINTPIVSTLVYSEGSPLPSPLDPPITLEYTLL
ETEERTKPVCVFWNHSIAIGGTGGWSSKGCELLHRNNTHISCQCNHMTSFAVLMDISKRE
HGDVLPLKIVTYTTVSASLVALLLTFILLALLRKLRSNLHSIHRNLVAALFFSELVFLIG
INQTDNPFVCTVIAILLHYFYMCTFAWMFVEGLHIYRMLTEVRNINHGQMRFYYAMGWGI
PAIITGLAVGLDPQGYGNPDFCWLSVHDTLIWSFAGPISVVVLVNIVIFVLAAKASCGRR
QRSFEKSGAIPALRMAFMLLLLISATWLLGLMAVNSDVMTFHYLFAIFSCLQGIIIFFFH
VIFNKEVRKNLKNVFTGKRALPDESSTTRASLLTRSLNCNTTYTEDGPLYRSAIGESTVS
LESTVRSAKSHSSYLAYTLRGDSGQKPSVSSGTAKAGHTDLDGSLFHRNGTKGGDDSDSD
SELSVDEHSSSYASSHSSDSEDDDMDIKPKWNNERQPLHSTPKGPSVAPKVEAVSNHVKP
YWPKEATTASDSEDPGGAERLRVETKVNVELHQENKLNHVGERGETPQDRETPTRENGPP
SLPSNGPSNGPPSTHQPEPKKGILKNKITYPPPLTDKNMKNRLREKLSDYNPPTISSSIP
PPIIPPSKTPSVASNDGVRPVSVGNSNSVIIKPPIAPRPQLPQNGGVDMSMTAMTTNGGN
ESDSEKTRVSLPL
NT seq
9222 nt
NT seq
+upstream
nt +downstream
nt
atggaattaccgatgtattggatctgggtttgtgttctattcaatgtgcccttgctagga
tgtttcgagctacacctttcggagacgttacaaactgggaccgttttggcaaatttgtcc
ctggggcccggttggatttacaaaatcgacaggactttaactcctaaatacattcagaac
tttttacaagtggaatggcaagaaggagctctccgtatgtacggaaaagtggattgtgtg
cgcttattgaggaacccggtgcctgtctatatcaggatagggtcgttgacgtctgaaaat
tttgttttgacacatttcaatacatttgtacacggacaggactgttttatcaaatacaag
agaaagagcacaataggtaagcccgacatttacatcaattacctttccaaactggaagca
acttcctgcttatccgcaggtcatttgcttgtgaatgtaacagaacttttgcctgccttt
acgcgaaatatcaatttttctgcatcatgcactactgggaaagacttgagagcagttttt
aaacatggcaatctattgctggacgacgactactgtttggggcacggagagctgagcgag
gtgcatttgcattgtacactgcgtgctctgagtgaccagcgcgtccgcgtctcggtgagc
gcgaggttgcggttggtgacagtggttgagggagagacccatgagcagttaacatcatca
cacaccatccagattgtgcctggcaaatggaacaaccgaaaacggagaaatgtgaacaca
cctccccagtttcagctccccaactaccaggtgtctgttcccgagaatgaaccatcaggg
acccgcgtcatcacactaaaggccactgatcctgatgatggagaggccggtagaatagag
tatggaatggaggccctctttgacagcagatccaacaacttttttgtaataaaccttcag
acaggtgctattacaacagtgcagcctttagatagggaggtcaaagacacacacgtcttc
aaagtaatggtaacagacaacggctccccacggcgttcagccacgtcttacctcacagtg
acggtcagcgacaccaacgaccacgggccggtgttcgagcagactgaataccgggtaacc
atacgggagaatgtagaggtgggctttgaggtcatgaccataagagccacagacggggac
gcaccctccaacgccaatatggtctataaaatagtcaacagcgacggagtgaacgctgga
tttgagatcgactcacgccacgggctggtgaggatcagagagcggcccgatagagagacc
atgtcccagtaccagctgatcgtggaagccaacgaccaggggaaagaccctgaaccccgg
agcgccacggccaccgtcaacatctctgtagaggacgagaacgacaactacccccagttc
agtgagaaacggtacgtggtccaaatccctgagaacgtggccgtcaactctaaagtcact
caagtcgaggccacggacaaagacgagggaaacaacgctaaggtccactacagcatcatc
agtggcaacgtaaagggacagttctacatccactctcccactggggtcatcgatgtcatt
aatcccctggattacgagatgattagggagtataatttacggattaaagctcaggatggc
ggcaggcctccgttgatcaacgggactgggatggtggtggtccaggtggttgacgtaaat
gataacgctcctatgtttgtcagcacgccgttccaagccactgtgctcgagaatgtggcc
attggctactcagtaatccacatccaggctatagacgctgattctggggataacgcccgt
ctggagtactgtctcaccgacacctcccctggtttccccttcaccatcaacaacagcact
gggtggatcacggtcgccgtggagctcgacagggaaaccactgagttctataccttcggc
atggaagcgagggattgtgggatacctgtgatgtcatcctcggccagcgtgagcatcacg
gtcctagatgtgaacgacaacatcccgaccttcacagagaaggtgtattctctaaagatt
aatgaggatgctgtggtggggaccagtgtgttgacagtgacagccgttgacagggatgta
aatagcgtcgtaacctatcagatctctagcggaaacaccaggaaccgtttcgccatcacc
agtcagagtggaggcgggctcatcaccttggcgttacccttagactacaaacaggagcgc
cagtacatcctgacagtgacggcttcggacggcacgcgttatgacatggcacaggtgttc
atcaacgtcactgacgccaatacgcaccgccccgtgtttcagagcgccaactaccaggtg
atgattagcgaggaccggcccgtggggtccaccgtggtcgtcatcagcgccactgacgaa
gacacgggtgagaacgctcgcatcacgtacatcatggaggacaacgtcccccagtttaag
attgaccccgacacaggcgccatcaccacccagatggagatagactacgaggaccaggcg
tcgtacacgctagccatcatcgccagggacaacggcattcctcagaagtccgatacaacc
tatgtggagataataatcctggatgccaacgacaacacacctcagttccaacgggacatg
tatcaggggactgtattcgaggacgcacccgtttacaccagcgtgctccagatatctgcc
tccgacagggactccgggtccaacggcaggctgagctacaccttccagggtggagatgac
ggggagggggacttcttcatcgagccctactctggcatcatcagaacagccaggaagcta
gacagagagaacgtgcctgtgtataccctgaaggccttcgctgtggataaggggattcct
cctctcaaagcagcggtggacatccaggtgtcggtgctggatattaacgacaatgcaccc
gtgttcgagaaggacgaactgtttatctacgtagaggagaacagtcccgtcagttccgtc
gtggctcggatcagcgccaccgacccagatgaaggaaccaacgctcagatcatgtaccag
atcgtcgaggggaacatccctgaggtcttcaagctggacatcttcaaaggcgacctcacc
gcccttacggacctcgactacgagtccagaaccgagtacgtcattgtggtccaggccacg
tccgctccgctcgtcagccgggccacagtccacatccgtttagtcgacatcaatgacaac
gacccggttctgcagaactttgagattatcttcaacaactatgtgaccaacaagtccaat
agtttcccctcagggatcatagggaaggtgcctgcccatgacccggacgtgtcggataaa
ctccactacagctttgagtcggggaatgagctgaacctactggtgctgaatgcagacaca
ggggaactaaagctcagcagagacctggataacaacagacctctagaggcccccatgact
gtctctgtctccgacggtatccatcgggtcacagccctgtgcaccttgcgtgtcaccata
atcacagacgacatgttgaccaacagcatcacggtgcgcctggagaacatgtctcaggag
cgcttcctgtcccctctgctgtccctcttcctggagggtgtagcagccgtgctctccacc
agccgccaggccgtctttgtgttcaacatccagaacgacacagacgtgcgcggcgccatc
ctcaacgtgaccttctcggcgctgcagccagggggccccccagggaggtacttcccctcc
gaggagctgcaggagcagatctacctgaaccgcaccctgctccgactaatatcatcacaa
caggtgcttcccttcgacgacaacatctgcctgagggagccgtgtgagaactacatgaag
tgtgtgtctgtgctgaagtttgacagctccccgcccttcatctcctctgacacggtgctg
ttccgtcccatccaccccatcaacggtctgcgctgccgctgtcctgcaggctttaccggg
gactactgcgagacggagatagacctctgctactcaggaccctgcaggaacaacgggaag
tgtcgcagccgagagggaggctatacctgcgagtgtcaggaagacttcactggtgagcac
tgtgaggtgaacgcccggttagggcggtgtgtcccgggggtgtgtaagaatggggggaaa
tgtgtggacctgctggtgggggggttcatgtgccagtgtcccccgggagagtacgagaag
ccttactgtgagatgaccactaggtcctttcctggtcagtctttcatcaccttcagagga
ctacgacagaggttccactttactgtctcgttcatgtttgccaccagagagaggaatgcc
ctgctgctgtacaatgggagatttaacgagaaacacgactttatcgccttggagattatc
gaggaacagatccaactcaccttctctgcaggagaggctaagaccgtggtccatcccttt
gttcccggaggggtcagtgacggtcactggcactctgtccagctgcactactacaacagg
cccaacattggtcgtctggggatcccccatggaccctcggctgagaaggtggctgtggtt
gctgtggacgactgtgacatcgccatggcagttcgctttggcaaccagatcggcaattac
tcctgtgctgcccagggcacccagaccggacagaaaaaatcattggacctgacaggaccg
ctgctgctgggtggtgttcccaacctgcccgaggacttccctgtgaggaacagagacttt
gtgggctgcatgaggaacctgagcatcgacagcaaacccacggacatggccagcttcatc
gctaacaacggaaccactgcaggttgtcctgccaagaggaacttctgtactaaggatttg
tgtcagaacggaggagtgtgtgtcaacaagtggaacacctacagctgtgactgtcctctg
ggcaacgggggaaaaacctgcgaacaagtgatgccgtcaccgcagcactttgacggccag
gccctggtgtcatggagtgacctcgacgtcaccatcgctgtgccctggtacatgggcctg
atgttccggacgaggcagggcactggcacgctgatgcaggctaacgctggagacttctct
actgtcaacctactgataagtgatcagtacgtgaggtttgaggtgtttctgggatctgag
cgggtagcggtgctgagcttccctcaagtcagggtgaacgatggggagtggcaccatgtc
ctcgtggagctgaagagcgtcaaagacggcaaggacatcaaatacatggccctggtgtca
ctggactacggactgtacaagaggtcagtggagataggtaatgagctgccaggtctgagg
ctgagggctctgtatctgggaggattaccaggagaggggaaccacgtccacgatggcttc
accggatgtatacagggtgtgcgtatgggtgagacatccaccaacgtggtcaatgtgaac
atgctgcagggctttaagattcgtgtagaggagggctgtgacctggctgacccctgtgac
tctaacatctgccctgagaacagccactgcagcgatgattggagcacacacacctgcgtc
tgcgacccagggtactttgggagggagtgtgttgacgcgtgtcacctcaacccctgcgag
cacgtgtccacctgcgtccgcaagcctagctcctcccatggctacacctgcgagtgtgga
cagaactactacggacagtactgcgaaaacaagattgagaagccgtgtgctcggggctgg
tgggggaaccccatgtgtggcccctgcaactgtgacatcggcaaagggttcaatcctgac
tgtaacaagaccagcggagagtgtcgctgcaaggataactactaccggcccaaggatgag
gacacctgttacccctgtgagtgcttccctctaggggcccactcccgtacttgtgacccc
cacaccggacagtgcccctgtaaagccggggtcatcggacaacagtgtaatcgctgtgac
aaccccttcgctgaggtcaccgccaccggttgcgaagtggtgtacgagggctgtcccaag
gccttcgaccaagggatctggtggcccaagaccaagtttggccgtcctgcagccatgaac
tgtcccaaaggatctatcggaactgctatccgccactgcagtgatgaaaagggctggctg
cctcctgaactctttaactgtaccacaggttccttctcccagctcatgaagatgaatgag
gagctgcatcgtaacgagtccaggatggacggcgagcgctccaaagctatcgtccgcctg
ctccacaacgccaccaaccacacggacagttactacggcaacgatgtgaagacagccttc
cagctgctgaccagggtcctccagtacgagagtcaacagacaggcttcgatctcacggcc
acgagagacgcagaattcaacgagaacctggtgagagcgggcagtgccatcctagaccct
ggcaccagagaccactgggagcagatccagcgctctgaggggggcaccgcccacctgctg
cgccactttgaggattacaccaacaccctggcacagaacatgaggaagacctacctcaaa
ccattcaccatcgtcactgacaatatgatcattgttgttgattacctggacacgtccgtc
cctgagcaggcctcattccctcgcttccatgagatccaggagtactaccccaaagatctc
acgtcctctgtccatttcccacagttcaacactaggccccaggaggtccccaacaaagta
gtcgagcctagccccagcgtcgagccctctcagaccgacgcccctgaagaggatcacacc
ctatccaataagagacgccgccatgtcgagcccgctgcccccctgcctgttgccgtggtg
atagtgttcaggtcgttgggtcagctcctccctgagcgatacgacccggaccgtaggagc
ctcaggctgcccaaccgtccagtgatcaacacccccatagtgagcacgttggtgtacagc
gagggttctcccctcccctctccccttgacccccccatcacactggagtacacactactg
gagacagaagagaggaccaaacctgtgtgtgtgttctggaatcactccatcgcgattggt
ggtacgggaggctggtcgtctaaaggatgtgagctactgcacaggaacaacacacacatc
agctgtcagtgtaaccacatgaccagcttcgctgtgctcatggacatctccaagagagag
catggtgacgtgttacccctaaagattgtgacctacaccacggtgtcagcctccctggtg
gccctgctcctcaccttcatcctgctggctctactcaggaagctacgctctaacctccac
agcatccacaggaacctggtggcggcactcttcttctccgagctcgtcttcctcatcggc
atcaaccagactgacaacccatttgtgtgtacggtgatcgccatcttgctccactacttc
tacatgtgtacgtttgcctggatgtttgtggagggcctccacatctaccgcatgctgacg
gaggtcaggaacatcaaccacggtcaaatgagattctactacgccatgggctggggcata
cctgcaatcatcacaggtctggcagtgggtcttgaccctcagggctatgggaacccagac
ttctgctggctctctgtccacgacactctcatctggagcttcgcaggacccatctctgta
gtcgtcctggtcaatatcgtcatctttgtactggcagctaaggcatcctgtggacgcagg
cagaggtccttcgagaagtctggagccattcctgctctgaggatggccttcatgctccta
ttgctcatcagcgccacctggctgttgggcctcatggccgtcaacagtgatgtcatgacc
tttcactacctgttcgccatcttcagttgtctgcagggcatcatcatcttcttcttccat
gtgatctttaataaagaagtgaggaagaatctgaagaatgtctttactgggaagagggct
ttaccggatgagtccagcactaccagagcatctctactcactcggtctctgaactgtaac
accacgtacactgaggacggtcctctgtacaggtcagccattggggagtccactgtttcc
ctggagagtaccgtcaggtcagccaaaagccacagcagctacctcgcttacacactcagg
ggtgactctggtcagaagcccagtgtgtcgtcggggacagctaaagcaggacacactgac
ctggacggatctctgttccacaggaacggcactaaaggaggagacgactcggactcggac
agtgagttgtctgtagatgaacacagctcgtcctatgcctcgtctcactcttctgacagc
gaagatgatgacatggacatcaagcccaagtggaacaatgagagacagcctctacacagc
acacccaaagggcccagcgtcgcacccaaagtggaagcagtgtccaatcacgtgaagcct
tactggcccaaggaggcgacgacagccagtgacagcgaggatcctgggggtgcagaacgg
ctgagggtggagaccaaggtgaacgtggagctgcaccaggagaacaaactcaaccatgta
ggagagagaggagagacaccccaggacagggagaccccaacaagggagaacggacctccc
agtctaccctccaatggaccttccaatgggcctcccagcacccaccagcctgagccgaag
aagggcatcctgaagaacaagatcacgtaccctcctcccttgaccgacaagaacatgaag
aaccgactgagagagaagctgagtgactacaaccctcccaccatctcctcctccatccct
ccccccatcatccctccatccaagaccccctccgtggcctccaacgacggggtgcgcccc
gtatctgtgggcaacagcaacagcgtaatcatcaagccgccgatcgccccacggccacaa
ttaccacagaatgggggcgtggatatgagcatgacggcgatgacgaccaacggaggcaac
gaatcagactccgagaaaaccagagtctctctgcccttatga
DBGET
integrated database retrieval system
