Coregonus clupeaformis (lake whitefish): 121581293
Help
Entry
121581293 CDS
T08357
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121581293
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121581293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_15
zf-met
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
121581293
NCBI-ProteinID:
XP_041752747
LinkDB
All DBs
Position
14:complement(19612514..19712905)
Genome browser
AA seq
1144 aa
AA seq
DB search
MADGPRCKRRKQANPKRNNVTNYNNVVEGQSDSDDEDKLHIVEEDPDGDSTVPEDASVVL
TQNGTETHQDTWDGVKEDCGSEQEDEEEEEGEEGEEEEGGKDALVEEMLQQGDTAVIYPE
APEDEQKSMPERRVPDENGTPDALSQLLTCPYCSRGYKRCTALKEHIKLRHEKSEDNFSC
SQCSYTFAYRTQLDRHMTQHKTQHKEPVQRHVPQTTTTTGGNRKFMCTECSKAFKYKHHL
KEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCVGMVPVNGTPRPVIKASQTPTTQ
TQLSGTAAVAPARLLLRGEKTDGKPLQEQLPLNQIKSEPVEYEYKPVAVGPNGAAGTNGT
VFTGGVAVPQGTTLPQGMVQTVVLPTVGLMSPISINLSDLQNVLKVAMDGNVLRQVLGTS
KQGVVGQAGQQVISAISLPGFVDQDGTTKIIINYTLEPKLAQQPSAPQLLKKEPPPAPTT
TTTTNTQPASKVTEKLSQDLSIVKTEQPDSEPESEKEMETEEAQTEAEQSKEGETPKAQT
GKTTCLLCDDCPGGLDALHMLQHCKPTNGEGGDGSPLDPSIAALLAESGITPGQPPLKNL
LSLLKAYFALNAEPSEEELAKISDNVSLPVVIVKKWFEKMRSGQITVEPPGSSSPQLSAE
PSTETQESQEKSGEQIEEQLASAQTQETSFSQPPNSSPASTSASPLVSASGPSPLNLSSS
GLVIVKTEEDSEGESQDLPLDLSLPKQPQSEPQVPHVPQEQPLNLTCLKKETLHPQLHPQ
LHPQLQAQLQAQGTTNTIYVTSPPQMATSSPVNIMTTQLVAITNQGSGMSCLRAISTGTT
KRTILIPQLTYTYTTTAGSNATGAEGAQKTVILNGFQEEKADTSSEGVSGVEEQNDSDSA
PPQKKMRRLESGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICNKAFKHKHHLIEH
TRLHSGEKPYRCDKCGKCFSHSGSYSQHMNHRYSYCKKEPQGDRQVGRRLGMSPEMSPQT
EEQQSDSRPTSPPSQLDSDERESEEELEEEEGEKEGMEAMSMDDIRVVQVGEDDEESEIY
EVEEFGEERQEDEEEGSREEEAHEEEEEGQQENKEEGSREEEKSVQQEQVCEEEEEGRRE
EECA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggaataacgta
acaaattacaacaatgttgtggagggccagtcagactcggatgacgaggacaagctacac
atagtggaggaggaccctgatggagacagcacggtgccagaagacgcctcagtagtatta
acccagaacgggacagagacgcaccaagacacctgggatggagtgaaggaggactgtggc
tctgaacaggaggatgaggaggaggaggaaggggaagagggggaggaggaggaggggggt
aaggatgccctggtagaggagatgctacagcagggggacacagcggtcatctaccctgag
gctccagaggacgagcagaagagcatgcctgagagaagggtcccagacgagaatgggacg
ccagacgctctttcccagctcctgacctgtccgtactgctcgcggggctacaagcgctgc
actgccctgaaggagcacatcaagctgcgtcacgagaagagcgaggacaacttcagctgc
tcccagtgcagctacaccttcgcctaccgcacacagctggaccgtcatatgacccaacac
aagactcaacacaaggaacctgtacagcgccacgtgccccaaaccacgacaacaacaggg
gggaataggaagttcatgtgcacagagtgttccaaggcttttaaatacaagcaccacctg
aaggagcacctgcgcattcacagcggagagaagccatacgagtgccccaactgtaagaag
cggttttcccactcagggtcctacagctcccacatcagcagtaagaagtgtgttggcatg
gtgcctgtcaacggtaccccccgaccagtcatcaaggcctcccagacccccaccacccag
acccagctttccggcactgctgccgtagcccctgcccgactgctcctccggggggagaag
acagatggcaagccccttcaggagcagctccccctcaaccagatcaaatcagagccggtg
gaatatgagtacaagccggtggcggtggggcctaacggggcagcggggactaacgggaca
gtgtttaccggtggcgtggcggtaccccagggcacgacgctgccccagggcatggtccag
acggtggtactgcccaccgttggtttgatgtctcctatcagtattaatctcagcgacctg
cagaacgtactcaaggtggccatggatgggaacgtgttgcgccaggtgctggggacgtcc
aagcagggggtggtggggcaagctgggcaacaggtcatctcagccatcagcctgcctggc
ttcgtagaccaggacggaaccaccaagatcattattaactacaccctggagcccaaactg
gcccaacagcccagcgcacctcagctcctcaagaaggagcctccccctgcccccaccacc
accaccaccacaaacacacagccagcctccaaagtaacagagaaactctcccaggacctc
agcatcgtcaagaccgagcagcccgactctgagcctgagtctgagaaggagatggagaca
gaggaggctcagaccgaggcagagcagagtaaggagggtgagacaccaaaggcccagaca
ggcaagacaacatgtctgctgtgtgatgactgtcctggtggtttggatgcactacacatg
ctccagcactgtaaacctaccaatggggaggggggcgacggcagccccctggatccctct
atcgccgccctgcttgcagaatcagggataacaccaggccagccccctctgaagaacctg
ctctccctcctcaaggcctacttcgccttaaacgcagagccctccgaggaagagctggcc
aagatctccgacaacgtcagcttgcccgtggtcatagtcaagaaatggtttgagaagatg
cggtccggtcagattaccgtcgagcctcctggttcctcttcccctcaactttcagcagaa
cccagcacagagacccaggaatcccaagagaagagcggagagcagatagaggagcaactt
gcctcggcccaaacccaggagacatcattttcccaacctcccaacagttcccctgcctcg
acctccgcctcccccttggtctcagcctcgggtccctcaccactaaacctctcctccagc
ggcctggtcatcgtgaaaacggaggaggactcggagggcgagtctcaagatcttcccctg
gacctgtcccttcccaagcagccccaatcagagccccaggtcccccatgtcccccaggag
caacccctcaacctcacctgtttgaagaaggagacgctccatccccagctccatccccag
ctccatccccagctccaggcccagctccaggctcagggaaccaccaacaccatctacgtc
acctccccaccccagatggccacctccagcccggttaacatcatgaccacccagctagta
gccatcaccaaccagggcagcggcatgtcctgcctcagggccatctccactggcaccacc
aaacggactatcctcatcccccagctcacctacacatacaccactacagcaggcagcaac
gccactggggccgaaggagcccagaagaccgtcatactcaacggcttccaggaggagaag
gctgacaccagctcagagggcgtgtcgggggtagaggagcagaacgactcggactcggcc
cctccgcagaagaagatgcgtcggctggagagtggcatgtacgcctgtgacctgtgtgac
aagatcttccagaagagcagctccctgctcaggcataaatacgaacacacaggaaaacgg
ccacacgagtgcggcatctgcaacaaagccttcaaacacaagcaccacttgatagaacac
acgcgtctgcactccggagagaaaccctaccggtgtgacaagtgtggcaagtgtttctcc
cactcgggctcctactcccagcacatgaaccaccgatactcatactgcaagaaggagccc
cagggagatcgtcaggtggggcgtcggctcggaatgagccccgaaatgagcccccaaaca
gaggagcagcagtcagacagccggcccacctcccctccctcccaactggactcagacgag
agggagagtgaggaggagctggaggaagaggagggagagaaggagggcatggaagccatg
agcatggacgacatacgggtggtgcaggtgggcgaggatgatgaagagagtgagatctac
gaggtggaggagtttggggaggagagacaagaggatgaggaagaagggagcagagaggag
gaggcacatgaggaagaggaggaaggacagcaggaaaataaggaggaagggagcagagag
gaagagaagtctgtacagcaggagcaggtgtgtgaggaagaggaggaagggaggagagag
gaggagtgtgcctga
DBGET
integrated database retrieval system
