KEGG   Coregonus clupeaformis (lake whitefish): 121581296
Entry
121581296         CDS       T08357                                 
Name
(RefSeq) cullin-3-like
  KO
K03869  cullin 3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120  Ubiquitin mediated proteolysis
cclu04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121581296
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    121581296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121581296
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121581296
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     121581296
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121581296
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 121581296
NCBI-ProteinID: XP_045080673
LinkDB
Position
14:19300049..19325555
AA seq 766 aa
MSNLKGGVKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAY
TMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDI
LMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA
IRNACQMLMILGLEGRTVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARIN
EEIERVLHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKL
FSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKTRFDRFLLESFNN
DRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFM
QEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNT
TMDEFRQHLQSTGVCLGGVDLTVRVLTTGYWPTQSATPKCTIPPSPRHAFEVFRRFYLAK
HSGRQLTLQHHMGSADLNATFHGPIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTIL
MLFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTVN
DQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVL
VAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtccaacctcaaaggcggcgtcaagaaagacaccaagatgaggataagagcctttcct
atgacaatggatgagaagtatgtcaacaacatctgggacctcctgaagaatgctatccag
gagatccagaggaagaacaacagcgggctgagcttcgaggagctctacaggaatgcctac
accatggtgctgcacaagcacggcgagaagctctacacgggcctgcgcgaggtcgtcacc
gagcacctcatcaacaaagtacgggaagatgtcctcaactcattaaacaataactttctg
cagacattgaatcaagcgtggaacgatcaccagactgcaatggtcatgatcagagacatc
ctcatgtacatggaccgggtgtacgtacagcagaacaacgtggagaacgtgtacaacctg
ggcctgatcatcttcagagaccaggtggtgcgctacggctgcatccgagaccacctccgc
cagaccctgctggacatgatcgcacgggagaggaagggagaggtggtggataggggagcg
atcaggaacgcctgtcagatgctgatgattctcggcctggagggcaggactgtgtacgag
gaagactttgaggcccccttcttagaaatgtctgcagaattcttccagatggagagccag
aagttcctagcggagaacagtgccagtgtgtacattaagaaggtggaggccaggatcaac
gaggagatagagcgggtgttgcactgcctggataaatccacggaggagcccatcgtcaag
gtggttgagcgggagctcatctccaaacacatgaagaccatcgtggagatggagaactct
ggcctggtccacatgctcaagaacggcaagacggaagacctgggctgcatgtacaagctg
ttcagccgtgtgcctaacggcctgaagactatgtgtgagtgtatgagctcctacctgagg
gaacagggcaaggctctggtgtcagaggagggagagggcaagaaccctgtcgactacatc
cagggcctgttggacctgaagacgcggttcgaccgcttcctcctggagtcgttcaacaac
gaccggctcttcaagcagacaatcgccggagactttgagtacttcctcaacctaaactcc
cgctcccccgagtacctctccctcttcatcgacgacaagctcaagaagggagtcaagggg
ctgacggagcaggaggtggagtccatcctggacaaggccatggtgctcttcaggttcatg
caggagaaggatgtgtttgagaggtactacaaacagcacctggcccggaggctgctcacc
aacaagagtgtctctgacgactccgagaagaatatgatctccaagctgaagaccgagtgt
ggctgtcagttcacctctaaactggaagggatgttcagagacatgagcatctccaacacc
accatggacgagttcagacaacacctacagtccacgggggtgtgtctagggggcgtcgac
ctcaccgtaagagtactcactactggctattggcccacacagtcggccacacccaagtgc
accatccccccctcccccagacacgccttcgaggtctttagaaggttctacttggccaaa
cacagcggcagacagttgacactgcagcaccacatgggctcagcagacctcaacgccacc
tttcacggcccaatcaagaaggaggatggttcggaggtaggagtgggaggagcacaggtg
acaggctctaacaccaggaaacacatactgcaggtctctactttccagatgaccatcctc
atgctcttcaacaacagagaaaagtccaccttcgaggagatccagcaggagacagacatc
ccggagagggagctggtgcgagcgctgcagtcgctggcatgcgggaagccaacccagcgc
gtcctcaccaaggagcccaagtccaaggagatcgagaacggccatgtgtttacagtcaac
gatcagtttacctcaaagctgcacagagtcaaaatacagacagtcgctgctaagcagggg
gagtctgaccctgagagaaaagagacgcggcagaaggtagacgacgacaggaagcacgaa
attgaagcggccatcgtccgcatcatgaagtccaggaagaagatgcagcacaacgtcctg
gtagcagaggtaacccagcagctgcgggcccggttcctccccagccccgtggtcattaag
aagcgcattgaaggacttatagagagagaatacttggcacggacgcccgaggaccgaaaa
gtctacacctacgttgcataa

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