Coregonus clupeaformis (lake whitefish): 121581498
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Entry
121581498 CDS
T08357
Name
(RefSeq) laminin subunit gamma-2-like
KO
K06246
laminin, gamma 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121581498
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121581498
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Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
Adhesin_P1_N
CAP_N-CM
RPN11_C
TACC_C
Motif
Other DBs
NCBI-GeneID:
121581498
NCBI-ProteinID:
XP_041752931
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Position
14:40692213..40708723
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AA seq
1148 aa
AA seq
DB search
MRILIYLIPIRFSVTMKSSWIFLCGLSLCTWSIQGTYIYGGSDICECNGKSRYCLPDSGG
LHCVDCQDNTEGRHCERCKEGFHHQRAGDSCLPCNCSPIGSVGSHCDSRGRCSCRAGAHG
EKCDRCLNGTPISSNGCAANGGQLTDNSVTAQSLPCFCYGHSTECSTAKGYSVHTITSTF
DDGPEGWRAATANGVTPSQVHFRWSPTHHDIEVISKDILPVYLYAPDSYLGNQELSYGQN
LSFSLRLDRGVRHPSTADVVLEGSGLSVAASLGDLRTIVPCGQKITYTFRLDEQQSSKWR
PLLSSFQFQTLLQNLTDIKIRGTFGENGRGYLDNVHMESARRGAGSPAAWVQKCSCPVGY
EGQFCEKCAAGYKRSSPSKGPYSSCEPCSCRGGSCDSETGDCYSADETPGRRTCPPGYYN
DPAQPQSCLKCPCPNGGACSVSPGFLKVKCDLCPPGTTGSRCHTCQDGFYGDPLGEDGVQ
RPCRHCQCNGHMDTNTVRSCDPRTGECLKCLNHTTGFFCESCLEGYHHSIPSEACKSCGC
NSQGSLYNKCSNQGQCSCREGFEGLKCQHSACPSCFNLVKTKMAGYTHKLQEIETIFTGM
ESGSLPVNNAQMEKAIRAAEDIVTDLQRNAQTLSESEKDLQARLSDISATQLSEGRDIQA
ISNTIDNIKLQDQKYQRQVSDVQRLISDVRRKLEEARFNIKQAEFPLGDAEAGTDTLSSL
VQRATDLAEKHQSKAGTVEKAANSALAKSEKSLALMRSVMTGENKIKELISDLKTKYDEN
SAQVKAMESLATRLSSSARDESRMATNTLEQIASLELGIPGPLKDIDGVVAKMAGLRERV
EKDLIGYQALQEDTQEDKAAVEDLLAQGKAAQQKYDQLLDRANAAKADTELALKDITDNI
DGVDNVLEMLRGFDGQINKNKTLADEAIKKLPGINATIHQAVGNNSETLFIIGSVSVDYN
DALGTVSSLEAVVSRLEGMSGSLPVPPAGLLKDATKLKEDVQGLQKQAVATVAKVASERA
NAEIQIDRAAEALLGATGAYNNAKHIRDAVGETLLVINNLLSMIGNPGSVDEERLGELEQ
SIASARGQVNQQLRPRLQDLEEKEAGQRTKLTGLNLDIDMVLDDIRNLEDIRANIPKGCF
NSPPIERP
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattgatctacttaattcccattagattttctgtgaccatgaagagcagttgg
atatttctgtgtggactttctctttgtacctggtctatccaaggaacctacatatatgga
ggatcagacatctgtgagtgcaatggaaagtcacgttattgcctgccagactctggtggc
ctccattgtgtggactgccaagacaacactgagggaaggcattgtgaaaggtgcaaggag
ggatttcaccaccagagggcaggagacagttgtctgccgtgtaactgcagccctataggt
tctgtaggctcacactgtgacagtagaggacgctgcagctgtagagcgggagcacatgga
gagaaatgtgaccgatgtctgaatggaacaccgatcagctcaaatggctgtgctgctaat
ggtggccagctcactgacaactcagtgacagctcaatctctaccttgcttttgctatgga
cactcgactgagtgctccacagccaagggatactcagttcacacaatcacctcaaccttc
gacgatgggccagaggggtggcgagctgccacagctaatggtgtgaccccgtctcaagtc
cacttccgctggtcccccactcatcatgacattgaggtcatctccaaagacatcctgcct
gtttacctctatgcccctgactcttacctgggcaaccaggagctgagctacggtcagaac
ctgtccttctccctgaggctggaccgaggggttcgccacccgtccacggctgatgtggtg
ctggagggatctgggctgagcgtggcagcttccctgggagacctgaggaccatcgttccc
tgtggacagaagatcacctacacattcagactggatgagcaacagagcagtaaatggagg
cccctcctttcatctttccagtttcaaacactcctccagaatctgactgacatcaaaatc
cgtgggacatttggagaaaatgggcgtggttaccttgacaacgtgcatatggagtctgcc
cgtcgaggtgccgggtccccagctgcatgggtacagaaatgtagctgcccagtgggatat
gagggccagttctgtgagaagtgtgctgcagggtataaaagaagttccccaagcaaaggt
ccatacagctcctgtgagccctgcagctgtagaggaggaagctgtgactctgaaacagga
gactgttactctgcagatgagacccctggtcgccgaacctgcccgccagggtattataat
gatcctgcccagccacagtcctgtctgaagtgtccctgtcccaatggaggtgcctgctct
gtgagcccaggattccttaaggtcaagtgtgacctctgtccacctggcaccactggctca
cgttgccacacctgccaggatggtttctatggtgatcccttgggagaagatggcgtccag
aggccttgtcggcactgccagtgcaacgggcacatggacaccaacactgtccgtagctgt
gacccacggacaggggagtgcctgaaatgcctaaatcataccactggcttcttctgtgag
agctgtctggagggctatcaccacagcatcccatcagaggcatgcaaatcttgtggctgc
aattcccaaggctctctgtacaacaaatgcagtaaccagggccagtgttcatgcagggaa
ggctttgaaggtctgaagtgccagcattctgcatgtccctcctgcttcaaccttgtcaag
accaagatggcggggtacactcataaactgcaggagatagaaactatttttacgggcatg
gagagtggcagtctgccagttaacaacgcccagatggagaaagccataagagcagcagag
gacatagtcacagacctgcaaaggaatgcacagacactctctgaatcagagaaagactta
caggcccggctctcagacatcagtgcaacccagctgagtgaaggcagagacatccaggcg
atctccaacaccatcgacaacatcaagctgcaggaccagaagtaccaacgtcaggtatct
gatgtccagagactcatcagcgatgtgcggcgcaaactagaagaggcaagattcaacatc
aaacaagctgaattccccttaggtgatgcagaggcgggcacggacaccctctcttctctg
gttcagagagcaacagacctggctgaaaaacaccagagcaaagcggggacagtggagaag
gcagcaaacagtgcccttgcaaagtcagagaagtccctggcactcatgagatctgtcatg
acaggggaaaacaagatcaaggagcttatcagtgatctcaaaaccaagtatgatgagaac
tcagcccaggtgaaggccatggagagcctggccactcgcctgagcagctctgcccgagat
gagagcaggatggcaactaacactctggagcagatagcctccctggagctgggaatccct
ggtcctctcaaggacattgacggtgtggtggccaaaatggctggcctgagagaacgggtg
gagaaggacctcatagggtaccaggcactgcaagaggacacccaggaggacaaggccgca
gtagaggatctcctggcccaggggaaggcagctcaacagaaatatgaccagctccttgac
agagcaaatgctgcgaaggctgacacagaactggccctgaaggatatcacagataatatt
gatggggtggataatgtactggagatgctaagagggtttgatggccagatcaacaagaac
aagactttggccgacgaggccataaagaaactccctggcatcaacgccaccattcatcaa
gctgttggcaacaactcagagaccctattcatcataggcagtgtgtctgtagactacaat
gatgcactgggcactgtcagcagcctggaagctgtggtctctcgactggagggaatgtcc
ggctcgttaccagttcctcctgctggtctgttgaaggacgccactaagctgaaagaggac
gtgcagggactgcagaagcaggcagtggccaccgtggccaaagtggcatcagagagggcc
aacgctgagatacagatagacagagctgcagaggctttattgggagcaactggtgcttac
aacaatgccaagcacatcagagacgctgtgggcgaaacactcctggtcatcaataacctt
ctgagcatgatcggtaatccaggcagtgtggacgaggagaggctaggtgagttggagcag
tccatcgccagcgctcgtggccaggttaaccagcagctacggcctcgactgcaggacctg
gaagagaaggaggccggccagaggaccaagttgactggcctcaacctagatattgatatg
gtcctggacgacatcaggaacttggaggacatccgtgcgaacatccctaagggctgcttc
aactccccacctattgagagaccttaa
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