KEGG   Coregonus clupeaformis (lake whitefish): 121581534
Entry
121581534         CDS       T08357                                 
Name
(RefSeq) zinc finger protein SNAI2-like
  KO
K05706  snail 2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    121581534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cclu03000]
    121581534
Transcription factors [BR:cclu03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    121581534
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_6 zf-C2H2_jaz C2CH-3rd_BIRD-IDD zf-Di19 Zn_SUZ12 Zf-C2H2_ZNF451_6th zf-C2H2_7th_ZNF462 zf-met Teflon_C Zf-C2H2_ZNF451_1st zf-C2HE Ogr_Delta zf-C2H2_15 DUF7410 Zf-C2H2_ZNF451_C
Other DBs
NCBI-GeneID: 121581534
NCBI-ProteinID: XP_041752962
LinkDB
Position
14
AA seq 260 aa
MPRSFLVKKHINSSKKPNYSELESPTVFISPYLYKGLPLPVIPQPEILSSVAYNPITVWT
TSSFPLSPLPNDLSPISGYPSSLSDTSSKDHSGSESPRSDEDDRMLTKLTDPHGAETEKF
QCSLCNKSYSTYSGLLKHKQLHCDAQTRKSFSCKYCEKEYVSLGALKMHIRTHTLPCVCK
ICGKAFSRPWLLQGHIRTHTGEKPFSCPHCSRAFADRSNLRAHLQTHSDVKKYQCKNCSK
TFSRMSLLHKHEESGCCVAH
NT seq 783 nt   +upstreamnt  +downstreamnt
atgccacgatcgtttcttgtcaagaaacatattaactcctctaagaagccaaattatagc
gagctggaaagccctacagtatttatttcaccgtatctctacaaaggcctcccattgcct
gtcattcctcaaccggagatccttagctcggtcgcgtacaaccctatcacagtatggact
acaagcagttttcctttatctccgcttccaaatgacctctctcccatctctggatacccc
tcatcgctctctgacacctcatccaaagaccacagcggctccgagagtcccaggagcgat
gaagacgatcggatgcttaccaaacttacagatcctcatggagcggagacagagaaattc
caatgtagtttgtgtaacaagtcctattccacgtattctggactgctaaagcataagcaa
ctgcactgcgacgctcagacgaggaaatctttcagttgtaaatactgcgaaaaggagtac
gtcagtcttggagccctaaaaatgcacatcagaactcacactttgccttgtgtctgtaaa
atatgtggcaaagctttctcaagaccgtggttgcttcagggacacatcagaacgcacact
ggagaaaagccattctcctgcccccattgcagtagggcttttgcggacaggtccaacctc
agggctcacctacaaacccattcggatgtgaaaaaataccaatgcaagaactgttccaaa
accttctccagaatgtctcttctgcacaagcatgaggaatctggttgttgtgtagcacat
tga

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