Coregonus clupeaformis (lake whitefish): 121581640
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Entry
121581640 CDS
T08357
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121581640
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
Patched domain-containing proteins
121581640
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
DUF4290
Motif
Other DBs
NCBI-GeneID:
121581640
NCBI-ProteinID:
XP_041753062
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Position
14:complement(4852100..4854532)
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AA seq
600 aa
AA seq
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MSRQWELDKVPKSIIRFFSITYTITISFAIVSSLRLDNVRNKVWVATIGVFSTGLAVLSS
FGMLLLMGLPFVMTVSSSPLLILGIGMNDMFIMISCWQKTNVHDSVIDRLADTYEDAAIA
ITITTLTDVLALYLGFSVPFGSVQTFCLYAGTAILFCYIYNITFLGAFLALNGQRETSNR
HWFTCVKIPVDCPPGKSRRYGICCVGGAYDHDTGTEEEQPISGFFGKYYGPFLTQKWTKA
SIVVLYAGFLAVSIYGCVELKQGIELKNLALDDSYIIKYYNNENTHFSHYGPNVMVAVNK
SLAYWEEDERKNLSLCIADFKKLENVDKNFSLSWLDSFQSFAKDLDINSENTFKSNLLPF
LEQRPMTRQDIHLVADNKIRSSRFFLQTLNISTSKKQKDMLISLRKTAEKCPIDLLVYHP
MFIYFDQYNVIVDNTIQTTVVATVVMLAISLLLIPNPLCSLWVAFSIGSIIVGIAGFMAL
WDVNLDSISMINLIIGIGFSVNFSAHVSYAFVSSAKADLNEKAVDALAQMGYPIVQGAVS
ILLGVVALYFSESYIFRTFFKLIFLVIMLGLVHGVAFLPVFLTFVGMCRNGWCSDATLNT
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacagtgggaattggacaaagttccaaagagtattattagatttttttccatc
acatatactattaccatttcttttgcaattgtttcaagcttaaggttggacaacgtgagg
aataaggtgtgggtggccaccattggagtcttctctacaggactagcagttctttccagt
ttcgggatgctgttgttaatgggtctgcctttcgtcatgactgtttcttcctccccttta
ctgatactgggtatcggaatgaacgacatgtttatcatgatctcctgttggcagaagacc
aatgtccatgacagcgtgatagatcgtctggcagacacctacgaagatgccgccatcgcc
atcaccataaccacactaacggatgtcctggcgctgtacctgggcttcagcgtgcccttt
ggctctgttcagaccttctgtctgtacgctggcacggctattcttttctgttacatctac
aacatcacattccttggcgcgttcttagcactgaatggccagagggaaactagcaaccgg
cactggttcacctgtgtaaagattccagtggattgtcctcctgggaagtcgagaaggtat
ggaatctgctgcgttggtggggcctatgatcatgacaccgggacagaggaggagcaacca
attagcggcttctttgggaagtattacgggccgtttctgacccagaaatggaccaaagcg
tccattgtggttctctacgccggatttctggctgtcagcatctatggatgtgttgaactg
aagcagggaattgaactaaagaacctggctttagatgattcctacattatcaaatattac
aacaacgaaaatacgcacttctctcactacggtccaaatgttatggtggctgttaataag
tcacttgcctactgggaagaagacgagcgcaaaaatctcagcttgtgcattgcagatttt
aaaaagttggaaaatgttgacaaaaacttctctctctcctggcttgactctttccaaagc
tttgcaaaggatcttgatataaactctgaaaataccttcaaaagcaacctgcttcccttc
ttggaacaacgtccaatgaccaggcaggacattcatttggttgcagacaacaagatccgc
tcatctcgcttttttcttcagacgctaaacatcagcacgtcaaagaaacagaaggacatg
ttgataagcctcagaaaaactgctgaaaaatgccccatcgatttactagtttatcatcca
atgtttatctactttgaccagtacaacgttattgtggataacaccatccagactaccgtg
gttgccacagtggtgatgctggcgatctccttactcctgatacccaacccgctctgttcg
ctgtgggtggccttctccattgggtcgatcatcgtgggcatagctggattcatggcgcta
tgggacgtgaatctggactcaatctccatgataaatctgatcatcggaatcggtttctca
gtgaacttttccgcccatgtctcgtacgcttttgtctcgagcgccaaggccgacttgaac
gaaaaggctgtggatgcgctggcccagatgggttatcccatagtgcaaggagctgtctcc
atccttttaggggtggtggcgctctatttctcagagagctacatcttcaggacttttttc
aaactcattttcttggttattatgctcgggctggttcacggtgttgctttccttcctgtg
tttttgacattcgttgggatgtgcagaaatggatggtgtagtgatgcaacactaaataca
tga
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