Coregonus clupeaformis (lake whitefish): 121581838
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Entry
121581838 CDS
T08357
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121581838
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121581838
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GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_14
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
121581838
NCBI-ProteinID:
XP_041753138
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All DBs
Position
1:6531998..6542258
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AA seq
659 aa
AA seq
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MFPGFSLGFCLALLFLGRFVCSACLSQCSCFFHKLSDGSNARSVICNDPEITLVPPNFPA
DTLKLRIEKTAITRISSETFHYLNSLEFLWMSFNSLNSLNVDSFRGLRSLDELRLEGNAL
TSFPWESLTDMPDLRLLDLHNNKISSIPAEATSYIKNLTYLDVSSNSLVTVPPEVLSTWL
SVKPSQGDGESSKYILGLHDNPWLCDCRLYDVVQFQKSPSSSVALIDTRLRCADPESLSG
VLFSETELQRCQEPRVHTAVARVRSSLGNNVLLRCGTIGVPIPELSWTRADGKQMNGTVQ
EEVSKEGIIWSLLSVRAVSYRDSGKYICKATNFVGTADAIISLVITDSFKNDEQGGSSKT
RNQRGRKTGGFGKAAYQDKLVTKYIPPPTTTAATPIIEPLGPGGFTGKHNIESYSISRSV
ADGQTPSPPITETAMQEVEKEILSNLAANASSLQAPAPPEKRVVRSVKVIGDTDHTVSLN
WRATAAKNTTEFSVLYAVFGERDMRRINVGAGKNRITIEGLVPRTKYIACVCVKGLIPKK
EQCVIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCKKLLERKSKDI
QESYVTFETLSPGQKPNGMEGEYLARRQPDESNRLLSARSSVGSEATCRTEGPPNEYFC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaggttttagtctgggtttctgtttggcattacttttcctcggacggtttgtt
tgcagcgcgtgtctgtctcaatgtagctgcttctttcacaaattatcagacggatccaac
gcaaggagtgtcatttgtaatgacccagagatcacgctggtcccacccaactttcccgca
gacaccttgaaactgcggatcgagaagactgccatcacaaggatttccagcgaaaccttt
cactacctcaacagtctggaatttctctggatgtctttcaattctctgaactctttaaat
gtagacagcttccgtggcctgagaagtctggatgagctgagactggaagggaacgctctc
acctctttcccctgggaatctctgactgatatgcccgacctcaggctactggacctgcat
aataataagatatcgtcgatcccggccgaggccaccagctatatcaagaacctgacctac
ctggacgtatctagcaacagcctggtcactgtacctcctgaggttctctctacgtggtta
tctgtgaaaccatctcaaggagatggggaaagttccaaatatattctaggtctccatgac
aacccgtggctgtgcgactgccggctctatgacgtggtccagttccagaagtctccatcg
tcctccgtggctctgatcgacaccaggctgcgctgcgctgacccagagagcctgtcgggg
gtgctgttcagcgagacggagctccagaggtgccaggagccccgggtccacacggctgtg
gcccgggtcaggagctccctggggaacaacgtcctgctgcgctgtgggaccatcggagtc
cccatcccagagctgtcctggacccgggcagatggcaaacagatgaacggcactgttcag
gaagaagtttcaaaggagggaatcatttggtccctcctgagtgtgcgtgctgtctcttac
agggactctgggaaatacatctgcaaagcgacgaacttcgtggggactgcagatgccatc
atctccctggttatcacagactcctttaaaaatgatgaacaaggtggcagctccaagact
agaaaccaaaggggacggaaaaccggtgggtttgggaaagctgcctaccaggataaactc
gttacaaaatacatacctccaccaaccaccacggcggccacgcccatcatcgaaccacta
ggaccaggcggtttcacaggaaagcataatatcgagagctacagtatttcgcgcagcgtg
gctgacggacagacgcccagtcctcccatcacggagacagcgatgcaggaagtggagaag
gagatccttagcaacctggcagccaacgcctcttctttacaggcgccggcgccgccggag
aaacgggtggtgcgatcggtgaaggtaatcggggacaccgaccacaccgtctccctgaac
tggcgggccacggcggccaagaacactacagagttcagcgtcctgtacgccgtgtttggc
gagagggacatgcggaggatcaacgtcggtgcgggaaagaaccggatcaccatcgagggc
cttgtgccaaggacaaagtacatcgcctgcgtctgcgtcaaaggcctgatcccaaaaaag
gagcagtgcgtaatcttctcaacggacgaggcggccagcgctagcggcacccagaagctc
attaacgtggtggtgatcaccgtggcctgcgtgatcgctgtccccctgacgttgatcgtc
tgctgcggggcgctcaagaagcgttgtaaaaagctactggagaggaaatccaaagatatc
caagaatcatatgtgacattcgagaccctctccccaggacagaagcctaacgggatggag
ggggagtaccttgccaggcgacagccagatgagtccaacagactgctctctgctaggtcc
agtgtgggctctgaggccacttgcaggactgagggaccgcctaacgagtacttttgttga
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