Coregonus clupeaformis (lake whitefish): 121581857
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Entry
121581857 CDS
T08357
Name
(RefSeq) rapamycin-insensitive companion of mTOR isoform X1
KO
K08267
rapamycin-insensitive companion of mTOR
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121581857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121581857
Membrane trafficking [BR:
cclu04131
]
Autophagy
Other autophagy associated proteins
mTORC2 complex
121581857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RICTOR_N
RasGEF_N_2
RICTOR_phospho
RICTOR_V
RICTOR_M
Motif
Other DBs
NCBI-GeneID:
121581857
NCBI-ProteinID:
XP_041753167
LinkDB
All DBs
Position
18:complement(31969076..32021425)
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AA seq
1800 aa
AA seq
DB search
MAVSIRGRPIRSLRMRGRNDSGEENVPLDLTREPSDNLREILQNVSKPHGITNMRKLGHL
NNFIKLLSSIGHCEEKFGFTYEEIIICLRLALLNEAKEVRAAGLRALRYLIRDSNVLQKV
LRLQVDYLVARCIDIQQSNEGERTQALRLVRKMITVNPLLFPSSVTNSLIAVGTDGLQER
DRMVRATIAIVCELALKNPEVVAKRGGLSAILKSVIDCQLSRINEALITTILHLLNHPHT
RQYIRNDVELEQILAPFTDFHYCHNADTSESHLKEDREARFLSSRMAIVASFRSWSGIIN
LCRAGNSGIQSLIGLLCIPNMEVREGLMEVLYEIFRLPLPIVTQDFTEALLSVDPSRCQD
SWRLSDGFVAAEAKVLLHHRARSRPDLMDNYLALVLSAFISSGLLEGLVEVVTSSEDQIS
VRATILLGELLHMANTILPHSHSHHLHCLPTLINMAASFDIPQEKRLRASAAVNHLKRFH
DKKKQGPKPHSLYLDHIVRKSVSAHQRRETHTRVHRDIYAIKYTEEALMLNLRDSQILNH
KQNLDWNWLLIATILKWPNVNLRNNKDEQMHKFVRRLLYFYKPSSKLYAGLELDHPKARQ
LTVVGCQFIEFLIESDEDGQAYLEELVKDMVAWLSLSSGLKPDRCLQSNGLLTTLSQHYF
LFLGTLSAHPHGIKLLEKCSLFQCLLNLCSVKNQGIVLKLAVSTLDYSRDGLARVILSKI
LTASTDTCRLYATKHLRVLLRAGVEFFSNWGMELLVTQLHDHSKAVSLEALDILDEACED
KANLHALIQLKPALSHLGDKGLLLLLRFLSIPKGFSYLNERGYVSKQLDRWQKEYNLKYV
DLIEEQLNEALTTYRKPVDGDNYVRRSNQRLQRPNVYLPVHLYGQLVHDKTGCHLLEAQS
VVSDLSYTVRSPMLDTWEGIKQLKAALWALGNVGSSNWGLNLLQDENVIPDILALAQHCE
VLSIRGTCVYVLGVISKTRQGCEVLKQYGWDAVRHSRRTLWPVTPDEVDTQMTSELSSVP
STLSLNSESTSSRHNSESEYQPNMYILDDYKCDMLDQSNDASLYLRSKPGNDRSPFTILA
STRFVRNRFLNSLTLPSKKLRSTSDPKAVGGSRTPTEPKLGGLRRNRTVTEPSIYSSSQG
DVFTPVFNGIGMPKSPTVSLDTSFVGTRSSVGGSEEQLGERRLDQAGGGEAGLGLGGPGE
PPSREQSSREHLAGGVGGSSSGGGGGTQFKSRSQSFNTDTTTSGISSMSSSPSRETAGNP
EPEPDSSDCVSLNTVVSAKTVKTLYSLTPTQAQTNHLPLSKSNSVFLVPPGSSHTLPRRA
QSLKSPTMAAIKSLADCSFMYTSPRDALGYATLKRLQQQRIHPSLSHSEALASPAKDILF
TDTITMKTGSLDSRLMPRSSAWAPEGFFPTAQSWYVDSKKQTEVEYLRLSAKRVSCSGPS
LADALRRPSRVYVPRLSAKRVSCPVVQPHRRMSISMPWFLKALSFASLDKEDLLSPINQS
TLHRSSSVRSMVSSANYGCNDDYVGLALPMDINDMFHIRDAPYFQQKTSPPTDKCPFYFG
DSDSDGGRPYPPIPLLKQQFSISELLASRENNQNHILGPEETGLQEHTDDNCLYCVGATV
LGYHTQPQINNTHTRTDYIDFPWSSQTNHRLEVMPQSKFSGVSGCSDAAVSQGYVSSTPT
PADILLGGKGISEDGPACRVLLRKEVLRLVINLSSSVGTKGHETGLLTIKEKFPYAFDDV
CLYSEVSHLLAHCMFRLPSRRFIQELFQDVHFIPMYEEAEAILSKPPKPVGVDINSPTES
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcagcatccgcggccgtcctatccgaagtcttcggatgcgaggtcggaatgac
agcggggaagagaacgtaccgctcgatctgacaagagaaccctctgacaacttgcgtgaa
atccttcaaaatgtctccaagccacacggcatcaccaacatgcggaaactgggccacctg
aacaatttcataaagctgctaagcagcattggccattgcgaggagaagtttgggtttaca
tatgaagaaatcatcatctgcctgcggttagccttgctgaacgaggccaaggaggtgcgt
gctgcagggttgagggctctgaggtacctcatcagagacagcaatgtgttgcagaaggtc
ctcagactgcaggtggactacttggtcgccaggtgcattgacatccagcagagcaatgag
ggggagaggactcaggccctcaggctggtcagaaagatgatcacagtgaaccccctgctg
ttccccagctctgtcaccaactctctgatcgccgtgggaacagacgggctgcaggagagg
gaccgcatggtccgtgccactatcgccattgtctgcgaactggcgttgaagaacccggag
gtagtggccaagcgggggggtctcagcgccatcttaaagagtgtgattgactgtcagctg
agccgcatcaatgaggctctgatcaccaccatcctccacctgctcaaccatccacacacc
aggcaatatatacgcaatgatgtggagctggagcaaatcctagcacctttcacagacttc
cactactgccacaatgccgacacatccgagagccacctcaaggaggaccgtgaggctcgt
ttcctgtccagcaggatggctatagtggcttccttccgttcctggtctgggatcattaac
ctctgtagggccgggaactctggcatccagtccctgattggtctgctgtgtataccaaat
atggaagtgagggaaggtttaatggaggtgttgtatgagatattcaggcttcctctcccc
atcgtaacccaggactttacggaagcacttctcagcgtggaccccagtaggtgccaggac
agctggagactgtctgatggctttgtggcagcagaggctaaagtcctcctgcaccatcga
gccagatccaggcctgacctgatggataactacctggccttggtactgtctgccttcatc
tctagtggcctgctagagggtctggtagaggtggtgaccagcagtgaggaccagatatca
gtgagagccaccatcctactaggagaactactacacatggccaacaccatcctccctcac
tcccacagtcaccacctgcactgtctgcccaccctcatcaacatggctgcctcttttgac
atcccccaggagaaacgccttcgggcgagtgcggctgtcaaccacttgaagcgtttccat
gacaagaagaagcaaggacccaaaccccacagtctgtatctggaccacattgtccgcaag
tctgtgtctgcacaccagcggagagagacacacacacgagtacacagagacatctacgct
attaagtacacagaggaagccctgatgttgaacctgagggacagtcagatcctcaaccac
aaacagaaccttgactggaactggctcctcatcgcaaccatcctcaagtggcccaacgtt
aacctcaggaacaacaaagatgaacagatgcacaagtttgtgcggaggctgctgtacttc
tataagcccagcagtaagctgtatgcagggctggagctggaccatcctaaagccagacag
ctcactgtggtaggatgccagttcatcgagttcctcatagagtctgacgaggatggccag
gcgtacctggaggagctggtgaaggacatggtggcctggctgtccttgtcctctggcctg
aagcctgaccgctgtctccagagtaatgggctgctcaccaccctcagccagcactacttc
ctgttcctggggaccctctcggcccacccacacggaattaaactgctggagaagtgcagc
ctctttcagtgtctgctgaacctttgctctgtgaagaaccagggcattgtgttgaagctg
gctgtgtctactctggactacagcagagatggactggccagagtcatcctctccaagatc
ctgactgcctccactgatacgtgcaggctgtatgccaccaagcacctgcgtgtgttgctg
agggcaggggtggagttcttcagtaactggggcatggagctgctggtcacccagctgcac
gaccacagcaaggctgtctccttggaggccctggacatactggacgaggcctgcgaggac
aaggctaacctccatgctctgatccagctcaaaccggctctgtcccacctgggagacaag
ggccttctgctgctcctcaggttcctgtctattcctaagggcttctcatacctcaacgag
agaggctacgtcagcaaacagttggacagatggcagaaggagtacaacctgaagtacgtc
gatctgatagaggagcagttgaatgaagcgttaactacataccgtaaacctgtggacgga
gacaactacgtcagacgcagcaaccaaaggttacagagaccaaatgtttatcttcctgtg
cacttgtatggtcagctggtccatgataagacaggctgccatctactggaggctcagagt
gtggtttctgacctcagctacacggttcgctccccgatgctggacacctgggagggcatc
aaacagctgaaggctgccctttgggctctgggtaacgttggctcatccaactggggtctg
aacctgctgcaggatgagaacgtcatccctgacatcctggctttggcacaacactgtgag
gtcctgtccatacgggggacttgtgtgtatgtgttaggcgtgatctccaagacacggcag
ggctgtgaagtgttgaaacagtacggctgggatgctgtcagacacagtcggcggacgctg
tggcccgtcacccctgacgaggtggacacgcagatgacctctgaactctcctccgtaccg
agcacactcagtctcaactccgagtccaccagctcccgacacaacagcgagagcgagtac
caacccaacatgtacatcctggatgattacaagtgtgacatgttggaccaatcaaacgac
gcctccctctacctccgctccaaacccgggaacgaccggagccctttcaccatcctggcc
tcgacccgcttcgtacgcaaccgcttcctcaactccctgacgctccccagcaagaagctg
cgctccaccagcgaccccaaggcagtggggggcagtcgcacccccaccgagcccaaactg
ggggggctgaggaggaacaggacggtcacagagccctctatctactcctcgtcgcagggc
gatgtgtttacgcctgtgttcaatgggattggcatgcccaagagtcccacagtcagcctg
gacacctcctttgtggggaccaggagctcggtgggggggtcagaggagcagctgggagag
aggaggcttgaccaggctggtggaggggaggctgggctggggctggggggtcctggagag
cccccctccagggaacagagtagccgggaacatctagcgggaggagttggtggttcctct
tccggaggagggggagggactcagtttaaaagccgcagtcagagcttcaacacggacacc
accactagcggcatcagctccatgagctccagcccctcccgcgagaccgctggaaacccg
gagcccgaaccagactcctcggactgtgtcagccttaacacagtggtctcggccaagaca
gtgaaaacactgtactccctcaccccaacccaggcccaaaccaaccacctgcccctctcc
aagtctaactctgtcttcctggtcccccctggctcctcacataccctcccccgcagagcc
cagagccttaagtctcccacaatggcggctattaagagcctggcggactgcagtttcatg
tacaccagcccgcgggacgcactaggctatgctactctgaagaggctgcagcagcagagg
atccacccgtctctgtctcatagtgaggcgttggcatcgcccgctaaagacatactgttc
actgatactatcactatgaagactggtagtctggactcgaggctgatgccacgcagctca
gcttgggctcctgaggggttcttccccacagcccagtcttggtacgtagacagcaagaag
cagactgaggtggagtacctcaggttgtctgctaagagagtgagctgttcaggccccagc
ctcgctgatgcactccgcaggccatccagagtctacgtccctcggttgtctgctaagagg
gtcagctgtccagttgtccagccacaccgcaggatgtccatctccatgccttggtttctg
aaggcattgagctttgcgtctctggacaaagaggatctgctgagccccatcaaccagagc
actctgcaccgttcctcctccgtgagatccatggtgtccagcgccaactatggctgtaac
gacgactacgtgggcctggcgctgcccatggacatcaacgacatgttccacatccgagac
gcgccttacttccaacagaagaccagcccgcccacagacaagtgcccattctactttgga
gactcggacagtgacggtggtcgtccatatccccctattccactgctgaagcagcagttc
agtatctcagagctgttggccagcagagagaacaaccaaaaccacatcctgggtccagag
gagacgggcctacaggaacacactgacgacaactgtctttactgcgtaggagctactgta
ctgggctaccacacgcagcctcagatcaacaacacacacacacgcacagactacatagac
ttcccgtggtccagtcagaccaaccatcgtctcgaggtgatgcctcagtccaagttctct
ggtgtctccggctgcagcgacgctgctgtatcacagggatatgtctccagcacacctact
cctgctgacatattgctgggtggcaaggggatatctgaggacggcccagcctgtcgggtt
ctgctgaggaaggaggtgcttcgtctcgtcatcaacctcagctcttctgttggaaccaaa
ggccacgaaacaggactactgacgataaaggagaagtttccctatgcatttgatgatgtc
tgtttgtactctgaggtgtctcacctgctggcccactgtatgttccgcctgccctctcga
cgcttcatacaggaactctttcaggatgtacacttcataccgatgtacgaggaagcagaa
gcgatcctgtcgaagccaccaaagcctgtcggagtggatataaacagtcccacggaatcc
tga
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integrated database retrieval system
