KEGG   Coregonus clupeaformis (lake whitefish): 121581864
Entry
121581864         CDS       T08357                                 
Name
(RefSeq) synaptobrevin homolog YKT6-like
  KO
K08516  synaptobrevin homolog YKT6
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130  SNARE interactions in vesicular transport
cclu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    121581864
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121581864
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121581864
Membrane trafficking [BR:cclu04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    121581864
SSDB
Motif
Pfam: Longin Synaptobrevin DUF8415 SLM4 DUF6621
Other DBs
NCBI-GeneID: 121581864
NCBI-ProteinID: XP_041753179
LinkDB
Position
18:32336426..32341016
AA seq 198 aa
MKLYSLSVLHKGATKSNLLKSAYDLSSFSFFQRSSVQEFMTFTSALIVERSAHGSRASVK
EQEYLCHVYVRNDSLSAVVIADSEYPQRVAFTLLDKVLEEFSRQVDSIDWPSGNPETINY
KALDIHLAKYQNPREADAMTKVQAELDETKIILHSTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq 597 nt   +upstreamnt  +downstreamnt
atgaagctgtacagcctcagcgtcctccacaaaggagcgactaaatccaacctccttaaa
tctgcctatgacctctcctccttcagcttcttccagcgctccagtgtccaagagttcatg
accttcaccagcgccttgattgtggagcgttctgcacacggcagtcgagcctcagtcaaa
gagcaagagtacctgtgccacgtgtatgtgaggaatgacagtctgagtgcagtggtgata
gcagacagcgagtacccccaaagggtcgccttcacactactagacaaggtgctagaggag
ttctccagacaagtggacagcatagactggccatctggaaaccccgaaaccatcaactac
aaagctctggacatccacctggccaagtaccagaaccccagagaggcagatgctatgacc
aaagtgcaggctgaactggacgagacaaagatcattctgcacagcaccatggagtctctg
ttggaaagaggggagaagctggatgatctggtgcagaagtctgaacacctggggaaccag
tctaaagcattttataagactgcacggaagcagaactcatgctgtgaggtcatgtag

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