Coregonus clupeaformis (lake whitefish): 121581872
Help
Entry
121581872 CDS
T08357
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cclu01100
Metabolic pathways
Module
cclu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121581872
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121581872
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
121581872
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
121581872
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
121581872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
TOBE_3
PycTM
Motif
Other DBs
NCBI-GeneID:
121581872
NCBI-ProteinID:
XP_041753190
LinkDB
All DBs
Position
18:32636264..32644307
Genome browser
AA seq
542 aa
AA seq
DB search
MCSGSTMLRRWLLALVARVGVIVLVVCCCLSLLYLLACKPPRSHSHQQALVWAGGATSKE
GYLALLQESEDTHRHYINSLSKQIAQLKEALQMRTQQLQESLEKARAKGVLPMGLEDLRR
PQTHTDLQEFFKAQLSRAEVQSSEKLPSEYAVIPFESFTLHRVYQLEMGLTRHPEERPVR
KDRRDELTGTLETALQVLNGPQRHGERHRRSYSPLDFIEGLTRTERDKGTVYELMFKGEG
PQDFRQLVFFRPFGPVVRVKNERVDTRHMLINIIVPLSRRADTFRQFINNFRKVCVQQEG
KTHLTVVYFGRDQIDEVKAIMDQTSRETQFRNFTLIQLNEEFSRGRGLEVGARAWRRSHN
VLLFFCDVDIHFTLDFLTSCRLNAEPGKKVFYPVLFSQYNPSLIDNNQSPFPSIQQQLVI
RKDTGFWRDFGFGMTCQYRSDFINIGGFDRNTKGWGLEDVHLYRKYLHSKLMVIRSPSRS
LFHLWHEKQCADELPPDKYKMCMQTKAMSEASHGHLGELFFTQEIQEHLQRQKLLNDSSR
LR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctggatccacaatgctccggaggtggctgttagctctggtggcccgtgttggg
gtcatagtgctggtggtgtgctgctgcctatctctcctctacctgctggcctgcaaaccc
cccagaagccacagccatcaacaggccctggtttgggctggaggagccaccagtaaagag
ggttacctggcgctactgcaggagagcgaggacacacacagacactatattaacagtctc
agtaagcagatagcccagctcaaagaggctctccagatgaggacccagcagctgcaggag
tctctggaaaaggccagggccaaaggggttctacctatggggctggaggacctgcgtagg
ccccagacacacaccgacctccaggagttcttcaaggcccagttgagccgggctgaggtc
cagtctagtgagaagttgcccagcgagtacgccgtgattcccttcgaaagcttcaccctg
cacagggtgtaccagctcgagatggggctgacccgtcacccagaggagaggcctgtgagg
aaggaccggagagacgagctgacaggcacgctggagacagccctgcaggtcctcaacgga
ccccagagacacggggagcgccaccgacgctcctattcaccattggacttcatagagggg
ctaacccgtacagagcgtgacaaggggacagtgtatgagctgatgtttaagggcgagggg
ccgcaggacttccgacagttggtgttcttcagacctttcggcccggtggtcagggtgaag
aatgagagggtggacacacgccacatgctcatcaatatcatagtcccactgtccaggagg
gctgacacattcagacagttcatcaacaacttcagaaaggtgtgcgtccagcaggaaggg
aagacccacctcactgtggtctactttggcagggaccagattgacgaggttaaagccatc
atggatcagacatccagggagacccaattccggaacttcacgctgatccaactgaacgag
gagttctctcgtgggcggggcttagaagtgggcgcacgggcctggagacggagccacaac
gtgctgctcttcttctgcgacgtcgacatccacttcaccctagactttctcacttcctgc
agactcaatgcagagcctggtaagaaagtgttctacccagtgctcttcagtcagtacaat
ccatcgcttatcgacaataaccagagtcccttcccttctattcaacaacaactggtgata
aggaaggacactggattctggagagattttgggtttggcatgacatgccagtataggtct
gatttcatcaacataggtgggtttgaccggaacaccaaaggctggggtttggaggatgtt
cacctgtacagaaagtacctgcacagcaagctgatggtgattcgctctccctcccgtagc
ctcttccacctgtggcatgagaagcagtgtgcggatgagctgccgccagacaagtataag
atgtgtatgcagaccaaggccatgagcgaggcctctcacggccacctgggggagctgttc
ttcacacaggagatccaggagcatctgcagaggcagaaactactgaatgactcaagtcgc
ttgaggtag
DBGET
integrated database retrieval system
