Coregonus clupeaformis (lake whitefish): 121581875
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Entry
121581875 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121581875
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121581875
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121581875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
Prok-RING_4
RINGv
zf-Nse
zf-RING_4
zf-RING-like
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
121581875
NCBI-ProteinID:
XP_041753193
LinkDB
All DBs
Position
18:32665163..32683647
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AA seq
362 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGLNVLLHHISLSPDVSFTIGSHFNRQQHSHATSCRHFQLG
PQAQLPIDFPMPHPGQPQSGINPHLAPPGHQHSPQLHPPLNPLPPAPQFQDLSVHPFLPP
ALHQQYLLQQQILEAQHRRIMPPSSRHQPHRLRPGYEFAPALHVPPQPAAQQPRYLAEGT
DWDLSVDTGLPPPQYHVRPLPQHYLTSPRMHHFPRNNASTQVVVHEIRNYPYPQLHLLAL
QGLNPSRHASAVRESYEELLQLEDRLGSVNRGAIQTTIERFTYPHKYQKRIPQDLKLGLE
DEELDTDEKCTICLSMLEDGEDVRRLPCMHLFHQACVDQWLATSRKCPICRVDIETQLTP
DS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggttttagtgcatgtcggatatctggttcttcctgtatttggctcagtaagaaataga
ggattgaatgtgttacttcaccatatctccctatcccctgatgtaagtttcaccatagga
tcccactttaaccggcagcaacatagccatgctacctcttgccggcacttccagctaggc
ccccaggcccagctacccattgacttcccaatgccccacccaggtcagccccagtcgggc
atcaacccccatctggctccccctggccaccagcattctccccagctccacccgccactc
aaccccctaccccccgcgccccagttccaggacctctctgtccaccctttcctacctccg
gccttacaccagcagtacctcctccagcagcagattctagaggcccagcaccggcgcatc
atgccaccttccagcagacaccagccccacagactgcgcccgggttacgagtttgctcct
gccctccacgtccccccacagcctgcggcccagcagcctcgctacctggccgaaggcaca
gactgggatttgagtgtggacacagggctgcctcctcctcagtaccacgtccgcccgctg
ccccagcactacctgacatctcccaggatgcatcacttccccaggaacaacgcctccacc
caagtggttgtccatgagatcagaaactacccgtatcctcagttacacctgctggctctg
cagggcctcaacccctcccgccacgcatccgctgtgagagagagctacgaggagctactg
cagctggaggacaggctgggcagtgtgaaccgaggggccatccagaccactattgaaagg
tttacctaccctcacaaataccagaagaggatacctcaggaccttaagctagggctggag
gatgaggaactggatacagatgagaagtgtaccatctgtctatcaatgctggaggatgga
gaggatgtcaggagattaccctgcatgcacctcttccaccaggcgtgtgtggaccaatgg
ctggccaccagtaggaaatgccccatatgcagggtggacattgagacccagctgacacca
gacagctga
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