Coregonus clupeaformis (lake whitefish): 121581880
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Entry
121581880 CDS
T08357
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121581880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121581880
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
121581880
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
121581880
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121581880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
Motif
Other DBs
NCBI-GeneID:
121581880
NCBI-ProteinID:
XP_041753201
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MDNVEVFDSPGKGRGLRATKELLSGDVLFSEPPFAAVVFDSLADKICHSCFRRQDKLQRC
GQCKFAQYCDKTCQSTGWKEHKLECGAIKAFGAIGDNFGKAPNENIRLAARIMWRLDKEG
SVMSDMQMTSLDDLENHISDMPEDDLKELKVDIHNFLDYWPRNSKQHRVDDISHIFGVIN
CNGFTVSDQRGLNAVGVGLFPNLCLVNHDCWPNCTVILNHGNQSAVNTVYHSQMRIELRA
LGKIEPGEEVTVSYVDFLNVTEDRQRQLKMHYFFDCTCEHCKGHIKDDLKMGGKEVDGVK
VPEEQVKEVTEYSLQMLQKMDKARMEGNYHEVIKICRECMEKQEPVLADTHIYQLRMWST
ASEVLAYLQFIDEAADYARKMVDGYNKLYHPCNAHLGMATMRAGVTHWQAGKIEVGHGMI
CKAYAILQRTHGPTHPITKDLEAMRMQTEMELRMFRENEYIYKSMREAALKNQPMSMMNE
PMAEGVKNLFRRQKK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgttgaggtgtttgactcacctggaaaggggaggggccttagagccactaag
gagctgctttccggagacgttcttttctcagaacccccttttgctgcagttgtctttgac
agtcttgcagacaagatctgccacagctgtttccgcagacaggacaagctgcaacgctgt
ggccagtgtaagttcgcccagtactgtgacaagacatgccagagcaccggctggaaggaa
cacaagctggagtgtggagccatcaaggctttcggggccatcggggacaacttcggaaag
gcaccaaatgagaacatccgtctggccgcccgcatcatgtggcgcctcgataaagagggc
agtgtcatgtcggacatgcagatgacctcattggacgatctggagaaccacatcagtgac
atgcctgaggatgatctaaaggagctgaaggtggacatccacaacttcctggactactgg
ccacgcaacagcaagcagcaccgtgtagacgacatctcacacatctttggagtgatcaac
tgtaatggcttcacagtgagtgaccagagaggtctaaatgccgtgggagttggtctgttc
cctaacctgtgtctggtcaaccatgactgctggcccaactgcactgtcatcctcaaccac
ggcaatcagtcggctgtgaatactgtgtatcactctcagatgaggattgagctgcgtgcc
ctgggtaagatcgagccaggtgaggaggtgacagtgtcctacgtggacttcctgaacgtg
actgaggacagacagagacagctgaaaatgcattacttctttgactgcacctgtgaacac
tgtaagggtcacatcaaagatgacctcaagatgggaggcaaggaggtggatggggtcaag
gtaccagaggagcaggtgaaggaggtaacagagtacagtctgcagatgctacagaagatg
gataaggctcgcatggaggggaactaccatgaggttattaagatatgcagggaatgtatg
gagaaacaggagccagtgttggctgatacacacatctaccagctaaggatgtggagcaca
gccagcgaggtgttagcctacctgcagtttattgacgaggccgctgactatgcacgcaaa
atggtggacggatacaataagctataccatccatgcaatgctcacctggggatggcaacc
atgagggcaggagtgacccactggcaggcagggaagatagaggtgggacacggcatgatc
tgtaaggcctatgccatcctgcagagaacccacggacccacacatcccatcaccaaagac
cttgaggctatgcgtatgcagacagagatggagttgaggatgtttagagagaatgagtat
atttacaaaagcatgcgggaggctgccctgaagaaccagccaatgagcatgatgaacgaa
cctatggcagagggcgtcaagaatctcttccgccggcagaagaagtga
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