Coregonus clupeaformis (lake whitefish): 121581960
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Entry
121581960 CDS
T08357
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121581960 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121581960 (dcp2)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
121581960 (dcp2)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121581960 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
121581960 (dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
121581960
NCBI-ProteinID:
XP_041753331
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Position
15:14231809..14243065
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AA seq
402 aa
AA seq
DB search
METKRGEIPNGVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNAPGLPQC
GIRDFAKAVFNHCPFLLPNGEDVQKVLEQWKEYKMGVPTYGAIILDESLDNALLVQGYLA
KSGWGFPKGKVNEDEAPHVCAVREVMEETGFDIKDRICKDTFIEQKITDQLARLYIIPGV
PKETKFNPKTRKEIRNIEWFPIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFVRPLREWIA
KRKGESTDSDEDFASNGSTPCKPLDKARSKHRRAQLLPEASPGEGWGKQKQPKPLGQLSQ
YELSELLKAKNPNVKVNGKKHQDSPNLKKRTNGVGNQQKEEKRLQPRRLQDNFDTDAALP
SDTCNSTNGQQAVCNGNCEQLSSRSFLNFKFDREAIMKCFDS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaaagaggggagattcccaacggcgtattggacgacctctgcagtcgattc
atcctccacatccctagtgaagagagggacaatgctatccgcgtgtgcttccagatcgag
cttgcccattggttctacctggacttctgcatgcagaatgcaccaggattacctcagtgc
gggataagggactttgccaaggctgtttttaatcattgtccattcctgctgcccaatggg
gaggatgtacagaaggttctagaacagtggaaggaatataagatgggtgttccaacctat
ggtgccattattctagatgagtcgcttgacaatgcattgctggttcagggctatttggcc
aagtcagggtggggctttccaaagggaaaagtgaatgaagatgaggctccccatgtttgt
gctgtacgagaggttatggaggagacgggtttcgatatcaaagatcgcatctgcaaagac
acgttcatcgagcagaaaatcactgatcagttggcccgattgtacataatacctggggta
cccaaggagacgaagttcaaccccaaaacaaggaaggaaataaggaacatcgagtggttc
ccgattgagaaactaccatgtcacaggaacgacatgactcccaagtctaaacttggactc
gcccccaacaagtttttcatggccattccttttgtcagaccactccgagaatggattgcc
aagcgtaaaggagagtctacagacagtgatgaggattttgcatccaacggcagcactcca
tgcaaacctctggacaaagcccgctccaagcataggcgggcccagctgttgcctgaggcg
tctccaggagagggctgggggaagcagaagcaacccaagcctctgggacagctgagccaa
tacgagctctcggaactcttgaaagccaagaaccccaatgtgaaagtcaatgggaagaag
caccaggattctcccaacctgaagaaaaggaccaatggagtcggcaaccagcagaaagag
gagaagagacttcagcccaggagactacaggacaacttcgacacagatgcagcattgcca
tctgacacgtgcaactccaccaatgggcagcaggcggtctgtaacggcaactgtgaacag
ctctcctccaggtccttcctcaacttcaagttcgacagggaggccatcatgaaatgcttt
gactcctga
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