Coregonus clupeaformis (lake whitefish): 121581979
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Entry
121581979 CDS
T08357
Symbol
psd3l
Name
(RefSeq) PH and SEC7 domain-containing protein 3 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121581979 (psd3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121581979 (psd3l)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121581979 (psd3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
121581979
NCBI-ProteinID:
XP_041753372
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All DBs
Position
15:23366769..23509872
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AA seq
1043 aa
AA seq
DB search
MDESDDGAETFVWVNSSSSHAQSVAKAKYQFLFGKGEDTSSTDSVSASNSHVLEEEGSSC
PSLDTCLQDDDIDETSLFLEIDRELANLLSGLSARSQNATAAHAQPEDSQHPADSSEQRS
AAIMIPCNGQNGASPDMASRTSERNGEGEEKETNVDLDMSGLGLDSPGDPLLSPTFLLDS
WTEALLKDTASLSSAAQKALGVSSVAAGVNGDFRNATAANCQEKTSAGLAAAAFTSGPCS
GAGEVPAVDQSEPARRGSEVAPEPAGGGPLLDEESLEESNKILAEIPGIFTAFLDGGQLR
EKPPKKLRFVESRPGSTTVATTDDCGQMGQERGSEDSVKGLEGDRSCSGLKVESSVDSPP
CRLSQEDEVFWVHQSPDGDAAREPSSDRSTNTNGSEDPSDNQDGKETSESQEATDVFSSQ
FESILESDRFRSTLYSSLDSLDALSSSADDEVDSCLTFDMPLTPMIQQRLKEMGHFVEVS
PDVGRQGERQEVLSVTTTGKSGKAALEVTSSYLEEVVASVDPAFSSQSDKYSSGPLANGV
ERDPKDWLHGCLSSDAGLKTALSDWDSDMGSTERLKGSTDTLLNGNRGDQEGARRLARRL
YHLEGFRRSDVAKHLGKNNDFSKMVAEEYLTFFEFTGMTLDLSLRSFLKAFALIGETQER
ERVLIHFSNRYYQCNPSVISSQDGAHCLTCALMLLNTDLHGHNIGKKMTCQEFINNLEGL
NGGQDFPRELLKALHNSIKNDKLEWAIDGDELKKSLSELADKDNKSITRISSGSNPFLDI
AHDPNAAVYKMGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGMILYLQKDEYKPEKALS
EEDLKNAISVHHALSIKAVDYEKKPNVLKLKTADWRVFLFQAQSPEEMDSWIRVVNSVAA
MFSAPSFPAAIGSQKKFSRPLLPATTTRMSQEEQLKSHEAKLKHVSTELAEHRSYPPDKK
VKAKEIDEYRLKEHYLEFEENRYEMYVKLLREGVKELLVGKDGDAGLKKSQSSPSLNQEG
QPAAAKVKRNTSERRPETPPKVT
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagtgatgatggggctgaaacgtttgtttgggttaacagctcgtcttcacat
gctcaaagtgttgcgaaggccaagtaccagtttctctttggaaaaggagaggacaccagc
tctactgacagcgtttcagcctcaaactctcacgtcttagaagaggaggggagcagctgc
cccagtctggacacctgtctccaggacgatgacatcgatgaaacctcgctgttcctggag
atcgaccgtgagctggccaacctgctgagcggcctcagcgccaggagccagaatgctaca
gccgcccacgcccaacctgaggacagccaacacccagcggacagtagtgaacagcggagc
gcagccatcatgatcccctgtaacggtcagaacggggcctcgccggacatggccagccgg
acctcagagagaaatggggagggggaggagaaggagactaatgtggacctggacatgtct
ggcctgggcctggattcaccgggagacccgctcctctcgcccaccttcctcctagactcg
tggacggaggcactgctgaaggatacggcttccctgagctcagcggcccagaaggccttg
ggcgtctcaagcgtggcggcgggggtaaacggagacttcaggaatgcgaccgcagcgaac
tgccaagaaaaaacaagcgccggcctggcggctgctgcattcacatctgggccgtgctca
ggggcgggtgaagtacccgcggtggaccagtcggagcctgcccggaggggttcagaggta
gcgcccgagcccgccggaggagggccactcctggacgaggagtccctggaggagtccaat
aaaatcctggccgagatccccggcatcttcaccgccttcctggacggtggccagctgagg
gagaagccccctaagaaactgcgctttgtggagagcaggccggggagcacgacggtggcg
acaacggacgattgtggtcagatgggacaggagcgagggagtgaggactcggtgaaggga
ctggagggagataggagctgcagcggtctgaaggtggagagctctgtggacagtcctccc
tgtcggctgtcccaggaggacgaggtgttctgggtgcaccagagccccgatggagacgcg
gcacgggagcccagctcggataggagtacgaataccaatggcagcgaggacccgtcagat
aaccaggatggcaaggagacatcggagagccaggaggccaccgacgtcttcagctcgcag
ttcgagagcatcctggagtcggaccgtttccgcagcaccctctacagcagcctggactcc
ctggacgccctgtcttcttcggctgacgatgaggtggactcatgcttaactttcgacatg
ccccttacgcccatgatccagcagcgcctcaaggagatgggccacttcgtggaggtgtcg
cccgacgtggggcgccagggggagcgccaggaggtgctcagcgtcacgaccacggggaag
agcgggaaagccgccctggaagtgacgtcgtcctacctagaggaggtggtagcgagtgtg
gaccccgctttcagcagccaatcagataaatattccagcggacccctggccaatggggtg
gagcgggacccaaaggactggctgcacggctgcctgagcagtgatgcagggctgaagacg
gcgctgtcggactgggactcggacatgggcagcacggagcggctgaagggcagcacggac
acactgctaaatggaaacagaggagaccaagagggggcccggcgcctcgcacgacgcctc
taccacctggagggtttccgccgctccgacgtggccaagcacctgggcaagaacaatgac
ttcagcaagatggtcgccgaagagtacctcacattttttgaatttacagggatgacattg
gatctatctctcagatctttcttgaaagcttttgcactaataggcgaaacccaggagagg
gaacgggttctgatccacttttccaataggtactatcaatgtaacccctcagtcatctcc
tcacaagatggagcccattgccttacatgtgctctgatgctgttgaacacggaccttcat
ggtcataatatcgggaagaagatgacgtgccaggaattcatcaataacctggaagggctg
aatggaggacaagatttccccagagagctcctaaaggccttgcacaactcaatcaaaaac
gacaagctggaatgggccatagatggagatgagctgaagaagtctctgtctgagctggca
gacaaggacaataaaagcatcacgcggatcagcagtggcagtaaccccttcctggacatt
gcccacgaccccaacgccgcagtctacaaaatgggcttcctggcccgcaaaatccacgcc
gacatggacggcaagaaaacaccgagaggaaagcgaggctggaaaacattctatgctgtt
ctcaaaggaatgatcctctacttgcagaaggatgagtacaagcctgagaaggccctctcg
gaggaggacctaaagaatgccatcagcgtccaccacgccttgtccatcaaagccgtggac
tacgagaagaagcccaacgtgctcaagctcaagacagccgactggagggtcttcctcttc
caggcccagagcccagaggaaatggactcttggatcagagtagtcaactctgtggcggcc
atgttctctgccccctcattccccgccgccattggctctcagaagaaattcagccgtcca
ctgctacctgccaccaccacgaggatgtcacaggaggaacagttgaagtctcacgaggcg
aagctgaagcatgtctccacggagttggcagagcacagatcctaccctcctgacaagaag
gtcaaagccaaggagatcgacgagtaccgactcaaagagcactacttggagtttgaggag
aaccgctatgagatgtacgtcaaactcctgagggagggtgtgaaggagctgctcgttggc
aaagatggcgacgcgggcctcaagaagtcccagtccagcccctctctcaaccaggagggc
cagccggccgcggccaaagtcaaacgcaacacctcggagaggagacccgagacgccgccc
aaggtgacatag
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