Coregonus clupeaformis (lake whitefish): 121581984
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Entry
121581984 CDS
T08357
Name
(RefSeq) homeobox protein SIX3-like
KO
K19473
homeobox protein SIX3/6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121581984
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
121581984
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
Harakiri
Motif
Other DBs
NCBI-GeneID:
121581984
NCBI-ProteinID:
XP_041753394
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Position
1:complement(12641173..12643123)
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AA seq
265 aa
AA seq
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MVFRSQLELFPAHLLLSRMLLLEEPPACASASALPGLRFSAAQVAGVCETLEETGDVERL
ARFLWSLPVAPGGACFIAEHESVRRARAVVAFHTGNYRELYCILENHSFTRRASHVKLQA
MWLEAHYREAERLRGRSLGPVDKYRIRKKFPLPRTIWDGETKTHCFKERTRGLLRERYLQ
DPYPDPARKRELARATGLTPTQVGNWFKNRRQRDRAAANKNRLAHHGMRPGAMLALARKE
CSPTRSACSPEMILSVMDSDSDFDI
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcagatcgcagctagagctctttcctgcccatctcctcctgtcccgcatgctg
ttactggaggagccccccgcatgcgcatctgcctctgctctccctgggctccgcttctct
gcagcgcaggtggccggtgtgtgtgagactctggaggagaccggggatgtcgagcggctc
gcgcggttcctgtggtccctgccggtggccccaggtggcgcgtgcttcatcgccgagcat
gagtccgtccggagggcgcgtgccgtggtcgcctttcacaccgggaactaccgcgaactc
tactgcatcctggagaaccacagctttacgcgccgcgcctcgcacgttaaactacaggcc
atgtggctcgaggcacactaccgggaggctgagaggctgcgcgggcggtcgctgggcccg
gtggacaagtaccgtatcaggaagaaattccctttaccaagaaccatctgggacggtgag
acgaagacacactgcttcaaggagcggacgcggggcctgctgagggaacgatacctccag
gacccctacccagaccccgcgaggaaacgggagctggcgcgcgccaccgggctcactcca
acacaggtcgggaactggttcaagaaccggagacagagagaccgcgcggccgccaacaag
aacaggcttgcgcaccacggtatgcgaccaggtgccatgctcgctctggccaggaaagaa
tgcagccccaccagaagtgcatgcagcccggagatgatcctctcggtaatggacagcgac
tcagactttgacatctga
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